RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 CA13Q8N1Q1 262 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 ZNF321PQ8N8H1 164 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 OR4K1Q8NGD4 311 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 NT5CQ8TCD5 201 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 KRT35Q92764 455 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 WDYHV1Q96HA8 205 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 SLC30A3Q99726 388 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 TSGA10Q9BZW7 698 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 AICDAQ9GZX7 198 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 NHEJ1Q9H9Q4 299 aaPredicted RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 ADAP2Q9NPF8 381 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 PNO1Q9NRX1 252 aaKnown RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 TREX1Q9NSU2 369 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 INTUQ9ULD6 942 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 PPP2R2CQ9Y2T4 447 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 EPN1Q9Y6I3 576 aaPredicted RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 C15orf38-AP3S2A0A0A6YYH1 394 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 CTAGE15A4D2H0 777 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 PSMD3O43242 534 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 ERN1O75460 977 aaKnown RBP12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 THBS1P07996 1170 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 CHRM3P20309 590 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 CCKARP32238 428 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 PTPN7P35236 360 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 HNRNPFP52597 415 aaKnown RBP12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 RNF4P78317 190 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 SF3B4Q15427 424 aaKnown RBP eCLIP12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 DCST1Q5T197 706 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 OPN5Q6U736 354 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 HSDL2Q6YN16 418 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 SYDE1Q6ZW31 735 aaPredicted RBP12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 CTAGE6Q86UF2 777 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 ABHD11Q8NFV4 315 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 FAM136AQ96C01 138 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 TRIB1Q96RU8 372 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 AMBRA1Q9C0C7 1298 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 UBQLN3Q9H347 655 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 RRAGDQ9NQL2 400 aaPredicted RBP12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 CCDC177Q9NQR7 707 aaPredicted RBP12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 TMEM160Q9NX00 188 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 ANAPC5Q9UJX4 755 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 BOKQ9UMX3 212 aaPredicted RBP12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 MED16Q9Y2X0 877 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 IKBKGQ9Y6K9 419 aa12.51□□□□□ -0.41
VCPKMT-201ENST00000395859 RCBTB2O95199 551 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 C1QAP02745 245 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 HPNP05981 417 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 CDH1P12830 882 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 ARNTP27540 789 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 CLCN7P51798 805 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 HADHBP55084 474 aaKnown RBP12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 GDF10P55107 478 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 COPS2P61201 443 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 FAM27E3Q08E93 113 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 SPA17Q15506 151 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 MPEG1Q2M385 716 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 PIGGQ5H8A4 983 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 C6orf52Q5T4I8 152 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 SLC22A10Q63ZE4 541 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 C22orf34Q6ZV56 151 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 LIX1Q8N485 282 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 ZNF441Q8N8Z8 693 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 FAM71DQ8N9W8 422 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 GIMAP7Q8NHV1 300 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 ZPLD1Q8TCW7 415 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 PTPMT1Q8WUK0 201 aaPredicted RBP12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 SLC44A1Q8WWI5 657 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 ZFP3Q96NJ6 502 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 UCN2Q96RP3 112 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 CHP1Q99653 195 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 SGPP1Q9BX95 441 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 ANGPTL4Q9BY76 406 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 KLHL28Q9NXS3 571 aa12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 CHCHD2Q9Y6H1 151 aaPredicted RBP12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 YLPM1P49750 1951 aaKnown RBP12.5□□□□□ -0.41
VCPKMT-201ENST00000395859 A0A096LNT2 108 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 PSMD12O00232 456 aaPredicted RBP12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 TRIM3O75382 744 aaPredicted RBP12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 NDUFS3O75489 264 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 ZNF189O75820 626 aaPredicted RBP12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 TNFSF13O75888 250 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 ESR1P03372 595 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 NPPBP16860 134 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 FMO4P31512 558 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 HSD17B7P56937 341 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 VEZF1Q14119 521 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 ELAVL1Q15717 326 aaKnown RBP12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 ETFDHQ16134 617 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 MORN4Q8NDC4 146 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 KIF18AQ8NI77 898 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 TMEM171Q8WVE6 324 aa12.49□□□□□ -0.41
VCPKMT-201ENST00000395859 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms