RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SAP18O00422 153 aaKnown RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 DYRK3O43781 588 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 UGDHO60701 494 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 SMIM24O75264 130 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 NEURL1O76050 574 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 CPN2P22792 545 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 PTX3P26022 381 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 MST1P26927 711 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 TLX1P31314 330 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 TRHRP34981 398 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 HNRNPFP52597 415 aaKnown RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 GTF2H2Q13888 395 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 PCBP2Q15366 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 TSNAXIP1Q2TAA8 658 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 KRTCAP3Q53RY4 240 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 DEPDC1Q5TB30 811 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 OR4C11Q6IEV9 310 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 GTF2H2CQ6P1K8 395 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 GALNTL5Q7Z4T8 443 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 FJX1Q86VR8 437 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 IFT20Q8IY31 132 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 TMEM52Q8NDY8 209 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 OR14A16Q8NHC5 309 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 HUS1BQ8NHY5 278 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 THAP3Q8WTV1 239 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 NCLNQ969V3 563 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 CSF3RQ99062 836 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 PAFAH2Q99487 392 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 MTERF1Q99551 399 aaKnown RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 ALOXE3Q9BYJ1 711 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 OR51B5Q9H339 312 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 IPPKQ9H8X2 491 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 MS4A12Q9NXJ0 267 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 SUCOQ9UBS9 1254 aaKnown RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 PPIEQ9UNP9 301 aaKnown RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 USP9YO00507 2555 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-205ENST00000395794 RTCAO00442 366 aaKnown RBP12.82□□□□□ -0.36
CXCL12-205ENST00000395794 KLK8O60259 260 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 COL6A2P12110 1019 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 COX7A2P14406 83 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 PPP2R1BP30154 601 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 SLAMF1Q13291 335 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 CPSF6Q16630 551 aaKnown RBP eCLIP12.82□□□□□ -0.36
CXCL12-205ENST00000395794 MTFR2Q6P444 385 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 HSDL2Q6YN16 418 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 GOLGA7Q7Z5G4 137 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 UBE3DQ7Z6J8 389 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-205ENST00000395794 PTGR2Q8N8N7 351 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-205ENST00000395794 APCDD1LQ8NCL9 501 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 MORN4Q8NDC4 146 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 MAGED4Q96JG8 741 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 GPR78Q96P69 363 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 MAPKAP1Q9BPZ7 522 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 HES7Q9BYE0 225 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 DMRT3Q9NQL9 472 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 KCMF1Q9P0J7 381 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 COPS7AQ9UBW8 275 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 VTI1BQ9UEU0 232 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 PHF11Q9UIL8 331 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 ZNF180Q9UJW8 692 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 KLF13Q9Y2Y9 288 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-205ENST00000395794 YARS2Q9Y2Z4 477 aaKnown RBP12.82□□□□□ -0.36
CXCL12-205ENST00000395794 TSC22D4Q9Y3Q8 395 aa12.82□□□□□ -0.36
CXCL12-205ENST00000395794 UTP20O75691 2785 aaKnown RBP12.82□□□□□ -0.36
CXCL12-205ENST00000395794 CPAMD8Q8IZJ3 1885 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 EXOC1LA0A1B0GW35 172 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 ASPDHA6ND91 283 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 NPIPA5E9PKD4 350 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 H0YIV9 168 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 KLRC4-KLRK1H3BQV0 150 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 NME2P1O60361 137 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 ITGA10O75578 1167 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 SCELO95171 688 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 CLDN9O95484 217 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 NME2P22392 152 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 SSR4P51571 173 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 CCNG1P51959 295 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 ARFIP1P53367 373 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 SRSF11Q05519 484 aaKnown RBP12.81□□□□□ -0.36
CXCL12-205ENST00000395794 BIKQ13323 160 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 TECRLQ5HYJ1 363 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 ZNF468Q5VIY5 522 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-205ENST00000395794 TTC19Q6DKK2 380 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-205ENST00000395794 CYP20A1Q6UW02 462 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 ZNF793Q6ZN11 406 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 GPR180Q86V85 440 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 GPALPP1Q8IXQ4 340 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 CYP4Z2PQ8N1L4 340 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 ARMC10Q8N2F6 343 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 POGLUT1Q8NBL1 392 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 OR5L2Q8NGL0 311 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 UHMK1Q8TAS1 419 aaKnown RBP12.81□□□□□ -0.36
CXCL12-205ENST00000395794 TANKQ92844 425 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 RELTQ969Z4 430 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 PHF21BQ96EK2 531 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 RBM18Q96H35 190 aaKnown RBP12.81□□□□□ -0.36
CXCL12-205ENST00000395794 OR8D2Q9GZM6 311 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 NOL11Q9H8H0 719 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms