RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 LIPAP38571 399 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 SGCGQ13326 291 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 PTGES3Q15185 160 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF805Q5CZA5 627 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 LY6G5CQ5SRR4 150 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 MEDAGQ5VYS4 303 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 RFLNAQ6ZTI6 216 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 SLC46A3Q7Z3Q1 461 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 CALHM3Q86XJ0 350 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 CPXM2Q8N436 756 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 ADAMTS15Q8TE58 950 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 RGMAQ96B86 450 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 CAMK1GQ96NX5 476 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 SLC22A12Q96S37 553 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 VNN3Q9NY84 501 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 MALT1Q9UDY8 824 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 ZSWIM8A7E2V4 1837 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 YES1P07947 543 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 MYL9P24844 172 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 PRR5P85299 388 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 PRKCDQ05655 676 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 KCNJ8Q15842 424 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 TMEM44Q2T9K0 475 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 FAM46CQ5VWP2 391 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 LIPKQ5VXJ0 399 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 BICRALQ6AI39 1079 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 PLAG1Q6DJT9 500 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 PRR23CQ6ZRP0 262 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 GALNT12Q8IXK2 581 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 TCEAL8Q8IYN2 117 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 CHPFQ8IZ52 775 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 PARP16Q8N5Y8 322 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 LINC01599Q8WXQ3 324 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 IRF7Q92985 503 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 NEIL2Q969S2 332 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 CPEB1Q9BZB8 566 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 TDP1Q9NUW8 608 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 TAS2R7Q9NYW3 318 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 CNOT2Q9NZN8 540 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 DPP7Q9UHL4 492 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 PADI2Q9Y2J8 665 aa11.17□□□□□ -0.62
UBE2D3-209ENST00000394804 METTL15A6NJ78 407 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 H0YIV9 168 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 OXSR1O95747 527 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 F11P03951 625 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 C1SP09871 688 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 ACPPP15309 386 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 PTPN2P17706 415 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 CTBSQ01459 385 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 HNRNPA0Q13151 305 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 PLPP4Q5VZY2 271 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 UNC5DQ6UXZ4 953 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 VRK3Q8IV63 474 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 TFGQ92734 400 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 CSF3RQ99062 836 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 NEURL2Q9BR09 285 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 SPRTNQ9H040 489 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 SLC52A3Q9NQ40 469 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 DEC1Q9P2X7 70 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 PCDHGB1Q9Y5G3 927 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 TRBV5-4A0A0C4DH59 114 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 CAPN5O15484 640 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 PLOD3O60568 738 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 MMP20O60882 483 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 RAB36O95755 333 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 DNTTP04053 509 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 OSMP13725 252 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 HSD17B2P37059 387 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 EIF2DP41214 584 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 NCBP2P52298 156 aaKnown RBP eCLIP11.16□□□□□ -0.623e-11■■□□□ 12.6
UBE2D3-209ENST00000394804 RAB14P61106 215 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 RPS26P62854 115 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 HBA1P69905 142 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 GINS1Q14691 196 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 CATSPEREQ5SY80 951 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 IER5LQ5T953 404 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 UBE2UQ5VVX9 321 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 STEAP3Q658P3 488 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 NXPE4Q6UWF7 544 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 GDPGP1Q6ZNW5 385 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 LACC1Q8IV20 430 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 WBP2Q969T9 261 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 CIDECQ96AQ7 238 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 YIPF6Q96EC8 236 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 OR2B2Q9GZK3 357 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 SLC6A13Q9NSD5 602 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 CALML5Q9NZT1 146 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 TMA7Q9Y2S6 64 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 PSIP1O75475 530 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 THOC7Q6I9Y2 204 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 DCUN1D3Q8IWE4 304 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 LRRC17Q8N6Y2 441 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 SRFBP1Q8NEF9 429 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 WFIKKN2Q8TEU8 576 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 MRPL48Q96GC5 212 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 STUB1Q9UNE7 303 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 PCDHGA6Q9Y5G7 932 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 A3GALT2U3KPV4 340 aa11.16□□□□□ -0.62
UBE2D3-209ENST00000394804 TEX28O15482 410 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms