RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.59□□□□□ -0.877e-8■□□□□ 11.3
UBE2D3-208ENST00000394803 MAP4K5Q9Y4K4 846 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 PRAMEF33A0A0G2JMD5 474 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 TMEM88BA6NKF7 163 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 H3BM21 787 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 PRAMEF10O60809 474 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 ETHE1O95571 254 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 C1QCP02747 245 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 YES1P07947 543 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 POU1F1P28069 291 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 XKP51811 444 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 HTRA3P83110 453 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 SLBPQ14493 270 aaKnown RBP eCLIP9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 HEPACAMQ14CZ8 416 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 CARTPTQ16568 116 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC5A12Q1EHB4 618 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF385BQ569K4 471 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC25A30Q5SVS4 291 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 ZNF362Q5T0B9 420 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 PDZK1Q5T2W1 519 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 HENMT1Q5T8I9 393 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 MFSD4BQ5TF39 518 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 C12orf73Q69YU5 71 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 TXNDC8Q6A555 127 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 GPR65Q8IYL9 337 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC7A5P1Q8MH63 180 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 KRT78Q8N1N4 520 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 CLIP4Q8N3C7 705 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 NANOGP1Q8N7R0 232 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 FAM181AQ8N9Y4 354 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 OR4K1Q8NGD4 311 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 OR5P2Q8WZ92 322 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 GLYATL1Q969I3 302 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 NEIL2Q969S2 332 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 PDXPQ96GD0 296 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 LRIG1Q96JA1 1093 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC22A12Q96S37 553 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 PHOX2BQ99453 314 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 MED18Q9BUE0 208 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 PRRG3Q9BZD7 231 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 POLR2J2Q9GZM3 115 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 HHATLQ9HCP6 504 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 ISYNA1Q9NPH2 558 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 GPATCH2Q9NW75 528 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 CD84Q9UIB8 345 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 KLHL20Q9Y2M5 609 aa9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 LSM2Q9Y333 95 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 CAB39Q9Y376 341 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-208ENST00000394803 OBSL1O75147 1896 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 TSPAN11A1L157 253 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 PIPSLA2A3N6 862 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 OR2AG2A6NM03 316 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 UPK3BL1B0FP48 263 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 UPK3BL2E5RIL1 263 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 H3BQ06 376 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 CTDSP2O14595 271 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 TSPAN6O43657 245 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 SH3BP5O60239 455 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 GPX5O75715 221 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 MFN2O95140 757 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 RAB36O95755 333 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 GASTP01350 101 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 H1F0P07305 194 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ELNP15502 786 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 MYL12AP19105 171 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 TNFRSF1BP20333 461 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 TCEA1P23193 301 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 PTBP1P26599 531 aaKnown RBP eCLIP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 GABRR2P28476 465 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 BMPR1AP36894 532 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 NR4A2P43354 598 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 BDKRB1P46663 353 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 DGKGP49619 791 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 STK19P49842 368 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ANXA11P50995 505 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ATN1P54259 1190 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 WDR5P61964 334 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 TBPL1P62380 186 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 IFITM2Q01629 132 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 CDK10Q15131 360 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 SSX1Q16384 188 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 BCL7AQ4VC05 210 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 DDI2Q5TDH0 399 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ZNF770Q6IQ21 691 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 CELF2-AS1Q8N7Q2 184 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 NR4A3Q92570 626 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ERLEC1Q96DZ1 483 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 LMLNQ96KR4 655 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 DHRS1Q96LJ7 313 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ZNF558Q96NG5 402 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 SPATA5L1Q9BVQ7 753 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 IL21Q9HBE4 155 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ZNF334Q9HCZ1 680 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ZSCAN32Q9NX65 697 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 ERVK13-1Q9NX77 482 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 QPCTLQ9NXS2 382 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 FAM8A1Q9UBU6 413 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 TBC1D24Q9ULP9 559 aa9.58□□□□□ -0.88
UBE2D3-208ENST00000394803 DIMT1Q9UNQ2 313 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms