RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 FSHRP23945 695 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 GDI1P31150 447 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 BTN3A2P78410 334 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 KCNC4Q03721 635 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 SNAP47Q5SQN1 464 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 SLC35F1Q5T1Q4 408 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 FBXO46Q6PJ61 603 aaPredicted RBP14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 VRK3Q8IV63 474 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 MRPL43Q8N983 215 aaKnown RBP14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 ZNF548Q8NEK5 533 aaPredicted RBP14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 PCBD2Q9H0N5 130 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 ZNF222Q9UK12 451 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 WASH3PC4AMC7 463 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 CRHBPP24387 322 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 HRH2P25021 359 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 ERVFC1P60507 584 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 TCTN1Q2MV58 587 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 PEX5LQ8IYB4 626 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 PRSS58Q8IYP2 241 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 LRIG1Q96JA1 1093 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 OCEL1Q9H607 264 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 HS3ST2Q9Y278 367 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 COLEC10Q9Y6Z7 277 aa14.05□□□□□ -0.16
SFMBT1-201ENST00000394752 GABRR3A8MPY1 467 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 SLC16A5O15375 505 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 ALPPP05187 535 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 C6P13671 934 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 RAB14P61106 215 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 COX18Q8N8Q8 333 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 A8MV72 311 aaPredicted RBP14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 ITPKBP27987 946 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 KHKP50053 298 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 ZNF155Q12901 538 aaPredicted RBP14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 GINS1Q14691 196 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 RGNQ15493 299 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 LIPKQ5VXJ0 399 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 HSDL2Q6YN16 418 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 NDNFQ8TB73 568 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 RPL3LQ92901 407 aaKnown RBP14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 SLC28A3Q9HAS3 691 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 RPRD1BQ9NQG5 326 aaKnown RBP14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 FAM170BA6NMN3 283 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 PRKAR1AP10644 381 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 NRIP1P48552 1158 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 STXBP1P61764 594 aaKnown RBP14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 ILF3Q12906 894 aaKnown RBP eCLIP14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 ATAT1Q5SQI0 421 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 C6orf120Q7Z4R8 191 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 PSD4Q8NDX1 1056 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 MAPKAP1Q9BPZ7 522 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 CLMPQ9H6B4 373 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 IL21Q9HBE4 155 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 NEUROD4Q9HD90 331 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 MSRAQ9UJ68 235 aa14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 GPC6Q9Y625 555 aaPredicted RBP14.04□□□□□ -0.16
SFMBT1-201ENST00000394752 CAPN5O15484 640 aaPredicted RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 KCNC3Q14003 757 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 RPS26P11Q5JNZ5 115 aaPredicted RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 DUS1LQ6P1R4 473 aaKnown RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 TSPYL5Q86VY4 417 aaPredicted RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 C9orf43Q8TAL5 461 aaPredicted RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 ASB11Q8WXH4 323 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 ZFP3Q96NJ6 502 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 MACROD1Q9BQ69 325 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 IFT27Q9BW83 186 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 P2RY12Q9H244 342 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 MCUBQ9NWR8 336 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 OR1A2Q9Y585 309 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 EIF3FO00303 357 aaPredicted RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 OR6A2O95222 327 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 RORCP51449 518 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 VLDLRP98155 873 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 EMX1Q04741 257 aaPredicted RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 ZSWIM9Q86XI8 627 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 OR5AR1Q8NGP9 310 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 TMED9Q9BVK6 235 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 TSSK6Q9BXA6 273 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 TTTY10Q9BZA0 68 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 TMEM27Q9HBJ8 222 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 A0A1W2PP55 124 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 IGLON5A6NGN9 336 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 GTPBP1O00178 669 aaKnown RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 GADD45AP24522 165 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 AOAHP28039 575 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 PIGAP37287 484 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 OR2B6P58173 313 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 CXXC5Q7LFL8 322 aaKnown RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 NANOGNBQ7Z5D8 188 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 TAF8Q7Z7C8 310 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 MEX3DQ86XN8 651 aaKnown RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 FAM46DQ8NEK8 389 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 MRPL48Q96GC5 212 aaKnown RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 ASPNQ9BXN1 380 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 GORASP2Q9H8Y8 452 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 RDH14Q9HBH5 336 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 PRDM8Q9NQV8 689 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 MRPL39Q9NYK5 338 aaKnown RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 DNMT3BQ9UBC3 853 aaKnown RBP14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 IL20RAQ9UHF4 553 aa14.03□□□□□ -0.16
SFMBT1-201ENST00000394752 KLHL33A6NCF5 533 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms