RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ARPC4-TTLL3A0A0A6YYG9 625 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ANHXE9PGG2 379 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 H3BUI4 141 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 SLC9A3R1O14745 358 aaPredicted RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 RGS5O15539 181 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 PRLP01236 227 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 VIPP01282 170 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 SLC2A4P14672 509 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ALAS2P22557 587 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 DGKGP49619 791 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 HK3P52790 923 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 MAPK12P53778 367 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 PSPHP78330 225 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 POU6F2P78424 691 aaPredicted RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 VLDLRP98155 873 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 TTLL9Q3SXZ7 439 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 TRIM48Q8IWZ4 208 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 STX19Q8N4C7 294 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 DENND6BQ8NEG7 585 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 CHTF18Q8WVB6 975 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 COQ8BQ96D53 544 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 OR52E6Q96RD3 313 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 MGLLQ99685 303 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ACAT2Q9BWD1 397 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 CDCA4Q9BXL8 241 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 BARHL1Q9BZE3 327 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 CIPCQ9C0C6 399 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 C11orf54Q9H0W9 315 aaPredicted RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 REEP1Q9H902 201 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 THUMPD1Q9NXG2 353 aaKnown RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 OBP2AQ9NY56 170 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 GPR83Q9NYM4 423 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 MAN2B2Q9Y2E5 1009 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 SPEGQ15772 3267 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 SLC28A1O00337 649 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 AKR7A2O43488 359 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 NARSO43776 548 aaKnown RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 GPX5O75715 221 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ZNF682O95780 498 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ADH1CP00326 375 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 OTCP00480 354 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 C9P02748 559 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 HOXB9P17482 250 aaPredicted RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 GABRB1P18505 474 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 RPS19P39019 145 aaKnown RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 KIR2DL3P43628 341 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 TTPAP49638 278 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ITGA1P56199 1179 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 PCDH1Q08174 1060 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ST3GAL4Q11206 333 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ABRAXAS2Q15018 415 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 TAF1AQ15573 450 aaPredicted RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 BTBD16Q32M84 506 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 LRRC66Q68CR7 880 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 SDE2Q6IQ49 451 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 GDPGP1Q6ZNW5 385 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 Q6ZVU0 165 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 UBASH3BQ8TF42 649 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 KCNJ9Q92806 393 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 TRIB3Q96RU7 358 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 HBEGFQ99075 208 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 TRMT61BQ9BVS5 477 aaKnown RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 TAPBPLQ9BX59 468 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 KCNK12Q9HB15 430 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 TIGARQ9NQ88 270 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 UCKL1Q9NWZ5 548 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 ZNF490Q9ULM2 529 aaPredicted RBP10.66□□□□□ -0.7
CUX1-204ENST00000393824 VPS4AQ9UN37 437 aa10.66□□□□□ -0.7
CUX1-204ENST00000393824 LAMA1P25391 3075 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 IQCMA0A1B0GVH7 501 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 RGS14O43566 566 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 PDE9AO76083 593 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 OR7A10O76100 309 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 WDR47O94967 919 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 DIRAS1O95057 198 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 NFATC1O95644 943 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 HSMCR30P0CW71 290 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 IL9P15248 144 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 RORCP51449 518 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 RHOAP61586 193 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 RPL38P63173 70 aaKnown RBP10.65□□□□□ -0.7
CUX1-204ENST00000393824 PTPRCAPQ14761 206 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 TAB1Q15750 504 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 GDPD1Q8N9F7 314 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 OR4M2Q8NGB6 313 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 LHFPL5Q8TAF8 219 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 LRRC20Q8TCA0 184 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 BTN2A2Q8WVV5 523 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 DNAJA4Q8WW22 397 aaPredicted RBP10.65□□□□□ -0.7
CUX1-204ENST00000393824 EPYCQ99645 322 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 ASPNQ9BXN1 380 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 HDHD5Q9BXW7 423 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 SCPEP1Q9HB40 452 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 SERHLQ9NQF3 203 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 RPS6KA6Q9UK32 745 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 HS3ST2Q9Y278 367 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 NOSIPQ9Y314 301 aaKnown RBP10.65□□□□□ -0.7
CUX1-204ENST00000393824 WDR87Q6ZQQ6 2873 aa10.65□□□□□ -0.7
CUX1-204ENST00000393824 E5RI56 91 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms