RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 NUDCD3Q8IVD9 361 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 METTL4Q8N3J2 472 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 EFCAB3Q8N7B9 438 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 IMMP1LQ96LU5 166 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 KCNA7Q96RP8 456 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 CSF3RQ99062 836 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 LPAR4Q99677 370 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 NUDT9Q9BW91 350 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 ZNF717Q9BY31 904 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 MRPL1Q9BYD6 325 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 ADAM29Q9UKF5 820 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 A0A0A6YYD5 115 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 TCRBV16S1A1N1A0A5B0 115 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 ARHGAP10A1A4S6 786 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 SYNDIG1LA6NDD5 238 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 ZWINTO95229 277 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 PRB1P04280 392 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 ALPPP05187 535 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 SERPINA7P05543 415 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 KLK1P06870 262 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 FAM58BPP0C7Q3 252 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 UROSP10746 265 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 HNRNPFP52597 415 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 Q0VFX4 171 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 VWA5B1Q5TIE3 1220 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 MRM1Q6IN84 353 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 PAPD4Q6PIY7 484 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 RIPOR1Q6ZS17 1223 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 SCUBE1Q8IWY4 988 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 HOMEZQ8IX15 550 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 TMEM52Q8NDY8 209 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 C7orf57Q8NEG2 295 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 HBEGFQ99075 208 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 SMAD5Q99717 465 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 SHCBP1LQ9BZQ2 653 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 TMBIM4Q9HC24 238 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 EML4Q9HC35 981 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 C5AR2Q9P296 337 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 DOCK10Q96BY6 2186 aa17.83■□□□□ 0.44
PDLIM7-204ENST00000393546 IGKV3D-11A0A0A0MRZ8 115 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 SERTM1A2A2V5 107 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 K7EM74 188 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 PROM1O43490 865 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 PRR35P0CG20 571 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 NR1D1P20393 614 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 SERPINB5P36952 375 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 BUD31P41223 144 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 SERPINB4P48594 390 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 HTR6P50406 440 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 FOXA1P55317 472 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 STX4Q12846 297 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 NFATC3Q12968 1075 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 EXT1Q16394 746 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 BTBD16Q32M84 506 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 CCNYL2Q5T2Q4 361 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 AGAP7PQ5VUJ5 663 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 FAM219BQ5XKK7 198 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 HPS6Q86YV9 775 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 PPP1R14CQ8TAE6 165 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 AGAP4Q96P64 663 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 WDR77Q9BQA1 342 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 ZNF552Q9H707 407 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 WDR41Q9HAD4 459 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 ATG4BQ9Y4P1 393 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 ASB4Q9Y574 426 aa17.82■□□□□ 0.44
PDLIM7-204ENST00000393546 AZIN1O14977 448 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 BIRC5O15392 142 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 TMPRSS11DO60235 418 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 GBAP04062 536 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 CHN1P15882 459 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 SERPINB3P29508 390 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 HNRNPH2P55795 449 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 GALNT1Q10472 559 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 TBL3Q12788 808 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 PLAG1Q6DJT9 500 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 JMJD6Q6NYC1 403 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 SCIMPQ6UWF3 145 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 HDXQ7Z353 690 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 COMMD6Q7Z4G1 85 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 CLNKQ7Z7G1 428 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 CUZD1Q86UP6 607 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 M1APQ8TC57 530 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 CHTF18Q8WVB6 975 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 TANKQ92844 425 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 ACPTQ9BZG2 426 aa17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 RPF2Q9H7B2 306 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-204ENST00000393546 WDR91A4D1P6 747 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 A8MUA0 341 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 GUCY1B2O75343 617 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 PDGFAP04085 211 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 UQCRHP07919 91 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 H2AFXP16104 143 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 TPP2P29144 1249 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 MAGOHP61326 146 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 TNFRSF17Q02223 184 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 BIKQ13323 160 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 SERTAD2Q14140 314 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 MPP2Q14168 576 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 IMPG1Q17R60 797 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 ARL13AQ5H913 290 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms