RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 REEP3Q6NUK4 255 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 IKBIPQ70UQ0 350 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 TAGAPQ8N103 731 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 ZNF740Q8NDX6 193 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 TRNT1Q96Q11 434 aaKnown RBP17.97■□□□□ 0.47
CBX1-202ENST00000393408 NUAK2Q9H093 628 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 CXorf36Q9H7Y0 433 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 FZD3Q9NPG1 666 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 EHD3Q9NZN3 535 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 DKK3Q9UBP4 350 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 ITM2BQ9Y287 266 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 TSC22D4Q9Y3Q8 395 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 TRBV4-1A0A0J9YWV2 114 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 LOC110117498-PIK3R3F6TDL0 507 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 ASNA1O43681 348 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 POU1F1P28069 291 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 IRS1P35568 1242 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 CASP3P42574 277 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 ALDH9A1P49189 494 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 GRIN2CQ14957 1233 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 LILRA6Q6PI73 481 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 KIAA0907Q7Z7F0 614 aaPredicted RBP17.97■□□□□ 0.47
CBX1-202ENST00000393408 PIK3R3Q92569 461 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 PDXPQ96GD0 296 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 OPALINQ96PE5 141 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 LINC00597Q9H2U6 94 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 SPHK2Q9NRA0 654 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 HCFC1R1Q9NWW0 138 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 ICKQ9UPZ9 632 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 PLXND1Q9Y4D7 1925 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 CTDSP2O14595 271 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 LILRB5O75023 590 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 DGKEP52429 567 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 DEFA1P59665 94 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 DEFA3P59666 94 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 BCL7AQ4VC05 210 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 DEPDC1Q5TB30 811 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 NRSN1Q8IZ57 195 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 CLIP4Q8N3C7 705 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 SORBS1Q9BX66 1292 aaKnown RBP17.96■□□□□ 0.47
CBX1-202ENST00000393408 HOXD1Q9GZZ0 328 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 REV1Q9UBZ9 1251 aa17.96■□□□□ 0.47
CBX1-202ENST00000393408 A0A075B6Q4 140 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 ENTPD6O75354 484 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 OXSR1O95747 527 aaPredicted RBP17.96■□□□□ 0.46
CBX1-202ENST00000393408 SYN1P17600 705 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 NOGQ13253 232 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 LEXMQ3ZCV2 418 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 RPS26P11Q5JNZ5 115 aaPredicted RBP17.96■□□□□ 0.46
CBX1-202ENST00000393408 LY6G5CQ5SRR4 150 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 CCDC149Q6ZUS6 474 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 VN1R5Q7Z5H4 357 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 GPR65Q8IYL9 337 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 ZNF557Q8N988 423 aaPredicted RBP17.96■□□□□ 0.46
CBX1-202ENST00000393408 VN1R2Q8NFZ6 395 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 KCNS3Q9BQ31 491 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 NLNQ9BYT8 704 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 ZBP1Q9H171 429 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 C11orf16Q9NQ32 467 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 MIEF1Q9NQG6 463 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 ITM2CQ9NQX7 267 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 FBXL12Q9NXK8 326 aa17.96■□□□□ 0.46
CBX1-202ENST00000393408 LSM2Q9Y333 95 aaKnown RBP17.96■□□□□ 0.46
CBX1-202ENST00000393408 A8MU76 341 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 TLR4O00206 839 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 CCL16O15467 120 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 DYRK3O43781 588 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 ADAP00813 363 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 SNRPGP62308 76 aaKnown RBP17.95■□□□□ 0.46
CBX1-202ENST00000393408 DEFB103AP81534 67 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 RHAGQ02094 409 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.95■□□□□ 0.46
CBX1-202ENST00000393408 ERAP2Q6P179 960 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 TCEAL4Q96EI5 215 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 IL4I1Q96RQ9 567 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 HHATLQ9HCP6 504 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 RBMX2Q9Y388 322 aaKnown RBP17.95■□□□□ 0.46
CBX1-202ENST00000393408 SNX8Q9Y5X2 465 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 LRRK1Q38SD2 2015 aa17.95■□□□□ 0.46
CBX1-202ENST00000393408 SOD1P00441 154 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 SCG5P05408 212 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 OSMP13725 252 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 NNMTP40261 264 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 PCYT1AP49585 367 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 FAM180BQ6P0A1 224 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 CEACAM20Q6UY09 585 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 PARS2Q7L3T8 475 aaKnown RBP17.94■□□□□ 0.46
CBX1-202ENST00000393408 GPR32P1Q8NGA4 272 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 CCDC32Q9BV29 185 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 RSPO3Q9BXY4 272 aaPredicted RBP17.94■□□□□ 0.46
CBX1-202ENST00000393408 UCK2Q9BZX2 261 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 CCDC177Q9NQR7 707 aaPredicted RBP17.94■□□□□ 0.46
CBX1-202ENST00000393408 CRNNQ9UBG3 495 aaPredicted RBP17.94■□□□□ 0.46
CBX1-202ENST00000393408 NDOR1Q9UHB4 597 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 NINQ8N4C6 2090 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 RPS26P62854 115 aaKnown RBP17.94■□□□□ 0.46
CBX1-202ENST00000393408 SEC23BQ15437 767 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 TMEM201Q5SNT2 666 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 SAXO2Q658L1 398 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 HORMAD2Q8N7B1 307 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms