RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 HHEXQ03014 270 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 RGNQ15493 299 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 NDUFAF5Q5TEU4 345 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 ABHD17CQ6PCB6 329 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 OLIG3Q7RTU3 272 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 ZNF554Q86TJ5 538 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 NUDT13Q86X67 352 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 RNF130Q86XS8 419 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 ACOT4Q8N9L9 421 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 FAM47BQ8NA70 645 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 VPS50Q96JG6 964 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 GRIP2Q9C0E4 1043 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 CHRDQ9H2X0 955 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 NT5DC2Q9H857 520 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 TBCCD1Q9NVR7 557 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 AHSPQ9NZD4 102 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 SIT1Q9Y3P8 196 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 AP1M2Q9Y6Q5 423 aa14.21□□□□□ -0.13
MKS1-202ENST00000393119 GCM2O75603 506 aaPredicted RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 ZNF682O95780 498 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 OPN1SWP03999 348 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 CDK9P50750 372 aaKnown RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 BTN3A2P78410 334 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 ABHD18Q0P651 414 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 FIGLAQ6QHK4 219 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 SPEM1Q8N4L4 309 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 FNDC8Q8TC99 324 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 SH3GL1Q99961 368 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 CHST8Q9H2A9 424 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 DDX31Q9H8H2 851 aaKnown RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 GORASP2Q9H8Y8 452 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 IL21RQ9HBE5 538 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 FAM60AQ9NP50 221 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 FSCN3Q9NQT6 498 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 AP4B1Q9Y6B7 739 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 SPAG17Q6Q759 2223 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 TLR4O00206 839 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 ACOX3O15254 700 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 TRMUO75648 421 aaKnown RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 FAM58BPP0C7Q3 252 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 ZNF888P0CJ79 500 aaPredicted RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 TNFRSF1BP20333 461 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 FASP25445 335 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 NDUFS1P28331 727 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 CCT8P50990 548 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 ABATP80404 500 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 LAPTM4AQ15012 233 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 AASDHQ4L235 1098 aaPredicted RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 C10orf62Q5T681 223 aaPredicted RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 ANXA8L1Q5VT79 327 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 MFSD9Q8NBP5 474 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 VPS37AQ8NEZ2 397 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 ADCY4Q8NFM4 1077 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 RNF31Q96EP0 1072 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 REXO5Q96IC2 774 aaKnown RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 SHDQ96IW2 340 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 OR2A5Q96R48 311 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 MAPKAP1Q9BPZ7 522 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 Q9H521 79 aa14.2□□□□□ -0.14
MKS1-202ENST00000393119 DCAF13Q9NV06 445 aaKnown RBP14.2□□□□□ -0.14
MKS1-202ENST00000393119 ERAL1O75616 437 aaKnown RBP14.19□□□□□ -0.14
MKS1-202ENST00000393119 SEMA3DO95025 777 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 GPIP06744 558 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 IL1RNP18510 177 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 ATP5A1P25705 553 aaKnown RBP14.19□□□□□ -0.14
MKS1-202ENST00000393119 NR1H2P55055 460 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 SPIDRQ14159 915 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 VMACQ2NL98 169 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 SPATS1Q496A3 300 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 KLHL35Q6PF15 583 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 ZBTB49Q6ZSB9 765 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 MSANTD1Q6ZTZ1 278 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 HOMEZQ8IX15 550 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 MAFAQ8NHW3 353 aaPredicted RBP14.19□□□□□ -0.14
MKS1-202ENST00000393119 CNBD2Q96M20 576 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 EFHD1Q9BUP0 239 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 SNX7Q9UNH6 387 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 U3KQV3 271 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 hCG_2014768A0A024R1R8 64 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 A0A1B0GTW7 788 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 UPK1AO00322 258 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 DLGAP1O14490 977 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 CLIC3O95833 236 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 BMP2P12643 396 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 HIST1H1TP22492 207 aaPredicted RBP14.19□□□□□ -0.14
MKS1-202ENST00000393119 CXCL12P48061 93 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 FOXD4Q12950 439 aaPredicted RBP14.19□□□□□ -0.14
MKS1-202ENST00000393119 ADPRMQ3LIE5 342 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 DEFB134Q4QY38 66 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 OTUD3Q5T2D3 398 aaPredicted RBP14.19□□□□□ -0.14
MKS1-202ENST00000393119 TMEM179BQ7Z7N9 219 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 C1orf216Q8TAB5 229 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 SLC47A1Q96FL8 570 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 PHF12Q96QT6 1004 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 FAIMQ9NVQ4 179 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 TAS2R9Q9NYW1 312 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 ASB4Q9Y574 426 aa14.19□□□□□ -0.14
MKS1-202ENST00000393119 OR2A25A4D2G3 310 aa14.18□□□□□ -0.14
MKS1-202ENST00000393119 GMNNO75496 209 aa14.18□□□□□ -0.14
MKS1-202ENST00000393119 CSF2P04141 144 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms