RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 RETREG1Q9H6L5 497 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 MYO9BQ13459 2157 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 ABCC6O95255 1503 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 C13orf42A0A1B0GVH6 325 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 A6NHS1 94 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 H3BSH0 61 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 SNAI1O95863 264 aaPredicted RBP12.62□□□□□ -0.39
LCA5-202ENST00000392959 MPC1LP0DKB6 136 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 OR12D1P0DN82 309 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 ALPPL2P10696 532 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 ERP29P30040 261 aaKnown RBP12.62□□□□□ -0.39
LCA5-202ENST00000392959 HYAL2Q12891 473 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 IRF5Q13568 498 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 GXYLT1Q4G148 440 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 ANKRD13BQ86YJ7 626 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 LSM14AQ8ND56 463 aaKnown RBP12.62□□□□□ -0.39
LCA5-202ENST00000392959 OR2T33Q8NG76 320 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 OVCA2Q8WZ82 227 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 NSMAFQ92636 917 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 GLYATL1Q969I3 302 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 MOAP1Q96BY2 351 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 CCDC120Q96HB5 630 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 DPH2Q9BQC3 489 aaPredicted RBP12.62□□□□□ -0.39
LCA5-202ENST00000392959 SPATA9Q9BWV2 254 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 SH2B3Q9UQQ2 575 aa12.62□□□□□ -0.39
LCA5-202ENST00000392959 LOC100509620A0A075B734 347 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 AHSA1O95433 338 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 CSTBP04080 98 aaKnown RBP12.61□□□□□ -0.39
LCA5-202ENST00000392959 GGT1P19440 569 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 PTNP21246 168 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 BMXP51813 675 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 PPP5CP53041 499 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 RPL19P84098 196 aaKnown RBP12.61□□□□□ -0.39
LCA5-202ENST00000392959 TSPYL5Q86VY4 417 aaPredicted RBP12.61□□□□□ -0.39
LCA5-202ENST00000392959 ANKRD60Q9BZ19 345 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 SDHAF3Q9NRP4 125 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 IFT52Q9Y366 437 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 E7EQ34 232 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 ACRV1P26436 265 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 SOX2P48431 317 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 PRMT2P55345 433 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 PMS2P3Q13401 168 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 DOC2AQ14183 400 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 C22orf42Q6IC83 251 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 SLC25A25Q6KCM7 469 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 ENPP6Q6UWR7 440 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 OR4K14Q8NGD5 310 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 OR5J2Q8NH18 312 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 L3HYPDHQ96EM0 354 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 STRA6Q9BX79 667 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 TTTY10Q9BZA0 68 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 ABCG5Q9H222 651 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 MRPS17Q9Y2R5 130 aaKnown RBP12.61□□□□□ -0.39
LCA5-202ENST00000392959 FAM208AQ9UK61 1670 aaKnown RBP12.61□□□□□ -0.39
LCA5-202ENST00000392959 SNAPC5O75971 98 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 ANXA3P12429 323 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 RHCEP18577 417 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 CAPN3P20807 821 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 LHCGRP22888 699 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 SLC9A3P48764 834 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 HK3P52790 923 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 RANBP10Q6VN20 620 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 PLEKHG7Q6ZR37 379 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 SPATC1Q76KD6 591 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 SLC29A4Q7RTT9 530 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 ZNF280BQ86YH2 543 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 CCDC28AQ8IWP9 274 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 CD93Q9NPY3 652 aa12.61□□□□□ -0.39
LCA5-202ENST00000392959 B4DGG1 531 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 LEFTY2O00292 366 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 RFPL2O75678 378 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 OR2B3O76000 313 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 CLUP10909 449 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 GDI1P31150 447 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 NCS1P62166 190 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 CLDN10P78369 228 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 FAM76BQ5HYJ3 339 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 TMEM151AQ8N4L1 468 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 FANK1Q8TC84 345 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 ZNF700Q9H0M5 742 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 GRHPRQ9UBQ7 328 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 LAMP5Q9UJQ1 280 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 NPIPA5E9PKD4 350 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 MRPL3P09001 348 aaKnown RBP12.6□□□□□ -0.39
LCA5-202ENST00000392959 HMGCLP35914 325 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 ETV3P41162 512 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 ZNF267Q14586 743 aaPredicted RBP12.6□□□□□ -0.39
LCA5-202ENST00000392959 KANK2Q63ZY3 851 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 ZNF776Q68DI1 518 aaPredicted RBP12.6□□□□□ -0.39
LCA5-202ENST00000392959 FAM43BQ6ZT52 329 aaPredicted RBP12.6□□□□□ -0.39
LCA5-202ENST00000392959 MSANTD1Q6ZTZ1 278 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 SDR39U1Q9NRG7 319 aaPredicted RBP12.6□□□□□ -0.39
LCA5-202ENST00000392959 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.6□□□□□ -0.39
LCA5-202ENST00000392959 ARMC1Q9NVT9 282 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 NPIPA1Q9UND3 350 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 LIPT1Q9Y234 373 aa12.6□□□□□ -0.39
LCA5-202ENST00000392959 PCDHGA7Q9Y5G6 932 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms