RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TMEM132CQ8N3T6 1108 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 B3GNT7Q8NFL0 401 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 OR4F6Q8NGB9 312 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 RDH11Q8TC12 318 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CAVIN3Q969G5 261 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 L3HYPDHQ96EM0 354 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 VMP1Q96GC9 406 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 NSUN5Q96P11 429 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CDK15Q96Q40 435 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 ZNF382Q96SR6 550 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CSF3RQ99062 836 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 MAPKAP1Q9BPZ7 522 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 WDR41Q9HAD4 459 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 STMN3Q9NZ72 180 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 GRID1Q9ULK0 1009 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 PLAAQ9Y263 795 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 COPG1Q9Y678 874 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 SCN2AQ99250 2005 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CCDC151A5D8V7 595 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 A8MUI8 341 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 SAP18O00422 153 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 SH3BGRLO75368 114 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 KRT6AP02538 564 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 KRT6BP04259 564 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 TUBBP07437 444 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 HSD3B1P14060 373 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 IMPDH1P20839 514 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 HSD3B2P26439 372 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CRHR1P34998 444 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 SLCO1A2P46721 670 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 KRT6CP48668 564 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CLCN2P51788 898 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 PRKAA2P54646 552 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CDH13P55290 713 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 PKNOX1P55347 436 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 TNFRSF17Q02223 184 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 SLAMF1Q13291 335 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 IGFBP7Q16270 282 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 PAGE2Q7Z2X7 111 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 GPR180Q86V85 440 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CRLF3Q8IUI8 442 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 NFAM1Q8NET5 270 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 OR14A16Q8NHC5 309 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 EPS8L3Q8TE67 593 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 DAZLQ92904 295 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 SNRNP40Q96DI7 357 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 TMEM237Q96Q45 408 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 PELOQ9BRX2 385 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 ROPN1BQ9BZX4 212 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 DDX31Q9H8H2 851 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 ROPN1Q9HAT0 212 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 BRF2Q9HAW0 419 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 NMRK1Q9NWW6 199 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 ADAM29Q9UKF5 820 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 FBXW2Q9UKT8 454 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 PCDHGB6Q9Y5F9 930 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CLDN16Q9Y5I7 305 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CSAG2Q9Y5P2 127 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 A0A0A6YYD5 115 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 A0A1W2PPM1 405 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 SMIM23A6NLE4 172 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 PYCARD-AS1I3L0S3 204 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 COPEO14579 308 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 MYO1DO94832 1006 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 WDPCPO95876 746 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 MYL2P10916 166 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 COX7A2P14406 83 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 BSGP35613 385 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 HNRNPFP52597 415 aaKnown RBP11.85□□□□□ -0.51
GGPS1-203ENST00000391855 IFFO1Q0D2I5 559 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 LCP2Q13094 533 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 UNC50Q53HI1 259 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 MRM1Q6IN84 353 aaKnown RBP11.85□□□□□ -0.51
GGPS1-203ENST00000391855 LETMD1Q6P1Q0 360 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 CYP20A1Q6UW02 462 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 ZYG11AQ6WRX3 759 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 SH2D5Q6ZV89 423 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 GPRIN3Q6ZVF9 776 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 RPS19BP1Q86WX3 136 aaKnown RBP11.85□□□□□ -0.51
GGPS1-203ENST00000391855 ARMC10Q8N2F6 343 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 RNF175Q8N4F7 328 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 HORMAD2Q8N7B1 307 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 MORN4Q8NDC4 146 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 TMEM52Q8NDY8 209 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 OR1N1Q8NGS0 311 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 TRPC4APQ8TEL6 797 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 SELENOMQ8WWX9 145 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 TANKQ92844 425 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 UTP23Q9BRU9 249 aaKnown RBP11.85□□□□□ -0.51
GGPS1-203ENST00000391855 ZNF717Q9BY31 904 aaPredicted RBP11.85□□□□□ -0.51
GGPS1-203ENST00000391855 DEFB126Q9BYW3 111 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 RPF2Q9H7B2 306 aaKnown RBP11.85□□□□□ -0.51
GGPS1-203ENST00000391855 PNO1Q9NRX1 252 aaKnown RBP11.85□□□□□ -0.51
GGPS1-203ENST00000391855 MKS1Q9NXB0 559 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 MAP10Q9P2G4 905 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 VTI1BQ9UEU0 232 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 CLCA3PQ9Y6N3 262 aa11.85□□□□□ -0.51
GGPS1-203ENST00000391855 ARHGAP10A1A4S6 786 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms