RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 RHEBQ15382 184 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 CELF5Q8N6W0 485 aaKnown RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 CLIP3Q96DZ5 547 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 STRA6Q9BX79 667 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 ELOA3DA6NLF2 546 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 TOXO94900 526 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 SLC35G6P0C7Q6 338 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 RHCEP18577 417 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 PVALBP20472 110 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 IDSP22304 550 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 OR12D2P58182 307 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 ELOA3BQ3SY89 546 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF627Q7L945 461 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF227Q86WZ6 799 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 C2orf73Q8N5S3 287 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 ELOA3Q8NG57 546 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 NXPE2Q96DL1 559 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 CHFRQ96EP1 664 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 OR51I1Q9H343 314 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 PCDHB11Q9Y5F2 797 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 C7orf72A4D263 438 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 B8ZZF3 427 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 SNTA1Q13424 505 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 KCNC3Q14003 757 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 LYSMD3Q7Z3D4 306 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF784Q8NCA9 323 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 OR2L3Q8NG85 312 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 GNPDA2Q8TDQ7 276 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 SAV1Q9H4B6 383 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 GPR83Q9NYM4 423 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 MED31Q9Y3C7 131 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 CHD4Q14839 1912 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 A0A1W2PQL4 384 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 CNMDO75829 334 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 VAMP1P23763 118 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 PDGFRLQ15198 375 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 TMED4Q7Z7H5 227 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 THOC6Q86W42 341 aaKnown RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 SHKBP1Q8TBC3 707 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 FRS2Q8WU20 508 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 IMP4Q96G21 291 aaKnown RBP18.94■□□□□ 0.62
SHANK1-203ENST00000391813 CH25HO95992 272 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 OR1E2P47887 323 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 GK3PQ14409 553 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 TMEM151AQ8N4L1 468 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 RGMAQ96B86 450 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 TM9SF2Q99805 663 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 TRMT61BQ9BVS5 477 aaKnown RBP18.93■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF350Q9GZX5 532 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 TMEM5Q9Y2B1 443 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 COL22A1Q8NFW1 1626 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-203ENST00000391813 A0A1W2PRU2 124 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 CLDN24A6NM45 220 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 CHMP24386 653 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 GDI2P50395 445 aaKnown RBP18.93■□□□□ 0.62
SHANK1-203ENST00000391813 CLDN10P78369 228 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 FTMTQ8N4E7 242 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 SLC22A17Q8WUG5 538 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 NPAP1Q9NZP6 1156 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 RENP00797 406 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 ADAP00813 363 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 GALTP07902 379 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 FDXRP22570 491 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 RPS5P46782 204 aaKnown RBP18.93■□□□□ 0.62
SHANK1-203ENST00000391813 S100A12P80511 92 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 EMX1Q04741 257 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-203ENST00000391813 OR13F1Q8NGS4 319 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 REEP4Q9H6H4 257 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 CHMP1AQ9HD42 196 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-203ENST00000391813 WDR6Q9NNW5 1121 aaKnown RBP18.93■□□□□ 0.62
SHANK1-203ENST00000391813 RBBP9O75884 186 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 KLK1P06870 262 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 HSD3B1P14060 373 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 LHCGRP22888 699 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 HSD3B2P26439 372 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 PRKCDQ05655 676 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.93■□□□□ 0.62
SHANK1-203ENST00000391813 CDKL4Q5MAI5 379 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 MAFIPQ8WZ33 124 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 HERVK_113Q902F9 699 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 COQ10AQ96MF6 247 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 PPA2Q9H2U2 334 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 OLAHQ9NV23 265 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 QPCTLQ9NXS2 382 aa18.93■□□□□ 0.62
SHANK1-203ENST00000391813 UBR2Q8IWV8 1755 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 BMP8BP34820 402 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 RCAN2Q14206 197 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 CHRNA6Q15825 494 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 BMP8AQ7Z5Y6 402 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 ISCA2Q86U28 154 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 IQCF2Q8IXL9 164 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 SYNPOQ8N3V7 929 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 TMEM248Q9NWD8 314 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 PTTG3PQ9NZH4 202 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 CD84Q9UIB8 345 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 C6orf47O95873 294 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 FGL1Q08830 312 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 AIMP2Q13155 320 aaKnown RBP18.92■□□□□ 0.62
SHANK1-203ENST00000391813 TMCO2Q7Z6W1 182 aaPredicted RBP18.92■□□□□ 0.62
SHANK1-203ENST00000391813 OR2T35Q8NGX2 323 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms