RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ARHGAP33O14559 1287 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SGTAO43765 313 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 MTX2O75431 263 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 PDYNP01213 254 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 VIPP01282 170 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 STSP08842 583 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 MLLT3P42568 568 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 GDF5P43026 501 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 RPIAP49247 311 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 KCNJ10P78508 379 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SCN1BQ07699 218 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SP140Q13342 867 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 RUNX3Q13761 415 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ELOAQ14241 798 aaKnown RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 GRIN2CQ14957 1233 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 DUSP7Q16829 419 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 HKDC1Q2TB90 917 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 TBRG1Q3YBR2 411 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 YIF1BQ5BJH7 314 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 FAM209AQ5JX71 171 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 OR4F3Q6IEY1 312 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SERPINA13PQ6UXR4 307 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 UBE2R2Q712K3 238 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 NOXA1Q86UR1 476 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 FAM124AQ86V42 546 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ATCAYQ86WG3 371 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 TRIM69Q86WT6 500 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SYNPOQ8N3V7 929 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 OR8J2Q8NGG1 315 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ASB11Q8WXH4 323 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 GLYATL1Q969I3 302 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 AP2M1Q96CW1 435 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 COQ10AQ96MF6 247 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 TSSK3Q96PN8 268 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 FEVQ99581 238 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 MGLLQ99685 303 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 DOHHQ9BU89 302 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SLC22A4Q9H015 551 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SLC32A1Q9H598 525 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 PAQR5Q9NXK6 330 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 GPRC5BQ9NZH0 403 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ITM2BQ9Y287 266 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 PCDHGA2Q9Y5H1 932 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 TNFRSF11BO00300 401 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SLC16A5O15375 505 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SPINT1O43278 529 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SSX4O60224 188 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 DNTTP04053 509 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ABCB1P08183 1280 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 HSMCR30P0CW71 290 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 CYP2A7P20853 494 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 OPRD1P41143 372 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 RFX2P48378 723 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 IDH2P48735 452 aaKnown RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 C21orf58P58505 322 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF33BQ06732 778 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ASAH1Q13510 395 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 SOWAHCQ53LP3 525 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ANKRD54Q6NXT1 300 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 XKRXQ6PP77 449 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 TMPRSS11AQ6ZMR5 421 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 LIX1LQ8IVB5 337 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ASZ1Q8WWH4 475 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ELMO1Q92556 727 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ARRDC3Q96B67 414 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 DTD2Q96FN9 168 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 PPP1R16AQ96I34 528 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 FAM129BQ96TA1 746 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 WRAP53Q9BUR4 548 aaKnown RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 TRAF4Q9BUZ4 470 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-202ENST00000381990 TAPBPLQ9BX59 468 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 RNF167Q9H6Y7 350 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 ARL15Q9NXU5 204 aa8.55□□□□□ -1.04
GPNMB-202ENST00000381990 COL4A3Q01955 1670 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 KRT87PA6NCN2 255 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 TBC1D3BA6NDS4 549 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 GFYI3L273 518 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 CTDSP2O14595 271 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 TRIM3O75382 744 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 PIPP12273 146 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 IL7P13232 177 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 ENDOUP21128 410 aaKnown RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 GJA4P35212 333 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 RORCP51449 518 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 METAP1P53582 386 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 CDC42P60953 191 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 RUNX1T1Q06455 604 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 CPSF6Q16630 551 aaKnown RBP eCLIP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 CCDC58Q4VC31 144 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 GPAT3Q53EU6 434 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF765Q7L2R6 523 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 LRRC70Q7Z2Q7 622 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 VRK3Q8IV63 474 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SFTPA1Q8IWL2 248 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 YAF2Q8IY57 180 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 PEX5LQ8IYB4 626 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 OR10G2Q8NGC3 310 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SKA2Q8WVK7 121 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 JPH3Q8WXH2 748 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SLC7A6Q92536 515 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms