RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 CAPS2Q9BXY5 557 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 ALOXE3Q9BYJ1 711 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 EHD1Q9H4M9 534 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 ADAP2Q9NPF8 381 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 PRDM7Q9NQW5 492 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 DEPPQ9NTK1 212 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 ERVK-11Q9UQG0 969 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 MRPS33Q9Y291 106 aaKnown RBP13.17□□□□□ -0.3
SHOX-202ENST00000381575 AKAP6Q13023 2319 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 A0A1B0GTH9 108 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 ADAM10O14672 748 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 OR6B1O95007 311 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 TGFB1P01137 390 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 GSTM2P28161 218 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 SPRP35270 261 aaPredicted RBP13.16□□□□□ -0.3
SHOX-202ENST00000381575 SOX3P41225 446 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 IRF9Q00978 393 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 DDX39BQ13838 428 aaKnown RBP13.16□□□□□ -0.3
SHOX-202ENST00000381575 ELAVL1Q15717 326 aaKnown RBP13.16□□□□□ -0.3
SHOX-202ENST00000381575 CMPK2Q5EBM0 449 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 ZDHHC24Q6UX98 284 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 IL20RBQ6UXL0 311 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 MAATS1Q7Z4T9 603 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 OR52N2Q8NGI0 321 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 FBF1Q8TES7 1133 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 DOK4Q8TEW6 326 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 PTPMT1Q8WUK0 201 aaPredicted RBP13.16□□□□□ -0.3
SHOX-202ENST00000381575 WDR34Q96EX3 536 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 EFCAB11Q9BUY7 163 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 MS4A8Q9BY19 250 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 CD244Q9BZW8 370 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 OR8D2Q9GZM6 311 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 IGSF5Q9NSI5 407 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 PPT2Q9UMR5 302 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 CLCA3PQ9Y6N3 262 aa13.16□□□□□ -0.3
SHOX-202ENST00000381575 HIVEP1P15822 2718 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ESYT3A0FGR9 886 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 LRRC14BA6NHZ5 514 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 FAM166BA8MTA8 275 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 A8MVJ9 347 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 PRRG2O14669 202 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ZFAND5O76080 213 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 CLDN14O95500 239 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 TPOP07202 933 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ATP5A1P25705 553 aaKnown RBP13.15□□□□□ -0.3
SHOX-202ENST00000381575 MAGEA4P43358 317 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 KIR3DL1P43629 444 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 STX4Q12846 297 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 CDKL4Q5MAI5 379 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.3
SHOX-202ENST00000381575 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 LRRC70Q7Z2Q7 622 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 GDF7Q7Z4P5 450 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ISCA2Q86U28 154 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 OR4N5Q8IXE1 308 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ACOT4Q8N9L9 421 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 PSD4Q8NDX1 1056 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ZNF473Q8WTR7 871 aaKnown RBP13.15□□□□□ -0.3
SHOX-202ENST00000381575 KCTD4Q8WVF5 259 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ASB15Q8WXK1 588 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ANP32BQ92688 251 aaKnown RBP13.15□□□□□ -0.3
SHOX-202ENST00000381575 SDCCAG3Q96C92 435 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 NXNL1Q96CM4 212 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 MTFMTQ96DP5 389 aaKnown RBP13.15□□□□□ -0.3
SHOX-202ENST00000381575 KCNC2Q96PR1 638 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 DMRTA2Q96SC8 542 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 TRIM8Q9BZR9 551 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 PITHD1Q9GZP4 211 aaPredicted RBP13.15□□□□□ -0.3
SHOX-202ENST00000381575 DEFB127Q9H1M4 99 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 OR51B5Q9H339 312 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 CHST11Q9NPF2 352 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 HPF1Q9NWY4 346 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 PPIEQ9UNP9 301 aaKnown RBP13.15□□□□□ -0.3
SHOX-202ENST00000381575 YARS2Q9Y2Z4 477 aaKnown RBP13.15□□□□□ -0.3
SHOX-202ENST00000381575 HRH3Q9Y5N1 445 aa13.15□□□□□ -0.3
SHOX-202ENST00000381575 MAP1AP78559 2803 aaPredicted RBP13.14□□□□□ -0.31
SHOX-202ENST00000381575 C17orf105B2RV13 164 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 KLRC4-KLRK1H3BQV0 150 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 ZNF354AO60765 605 aaPredicted RBP13.14□□□□□ -0.31
SHOX-202ENST00000381575 CTNSO60931 367 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 PRKRAO75569 313 aaKnown RBP13.14□□□□□ -0.31
SHOX-202ENST00000381575 TNNI3P19429 210 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 CASQ1P31415 396 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 PTGS2P35354 604 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 SSR2P43308 183 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 HK2P52789 917 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 SLC7A5Q01650 507 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 TGM3Q08188 693 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 LAPTM5Q13571 262 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 HIST2H2ACQ16777 129 aaPredicted RBP13.14□□□□□ -0.31
SHOX-202ENST00000381575 ZNF750Q32MQ0 723 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 PAGE2BQ5JRK9 111 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 HIST2H2AA3Q6FI13 130 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 SYT10Q6XYQ8 523 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 HSDL2Q6YN16 418 aa13.14□□□□□ -0.31
SHOX-202ENST00000381575 TBC1D1Q86TI0 1168 aaPredicted RBP13.14□□□□□ -0.31
SHOX-202ENST00000381575 MYLK4Q86YV6 388 aaPredicted RBP13.14□□□□□ -0.31
SHOX-202ENST00000381575 TMEM132CQ8N3T6 1108 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms