RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 IFNA16P05015 189 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 CERS1P27544 350 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 MEOX1P50221 254 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 ARFIP1P53367 373 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 PLTPP55058 493 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 ADORA2A-AS1P86434 159 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 CHIT1Q13231 466 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 BMPR2Q13873 1038 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 OR4D1Q15615 310 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 AP5B1Q2VPB7 878 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 MED27Q6P2C8 311 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 VN1R5Q7Z5H4 357 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 ZNF227Q86WZ6 799 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 SULF2Q8IWU5 870 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 SPATA6LQ8N4H0 392 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 PPM1NQ8N819 430 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 FAM47BQ8NA70 645 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 ZFP62Q8NB50 900 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-202ENST00000381208 MS4A8Q9BY19 250 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 UNKQ9C0B0 810 aaKnown RBP12.09□□□□□ -0.47
RPAIN-202ENST00000381208 TSPAN10Q9H1Z9 355 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-202ENST00000381208 HPF1Q9NWY4 346 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 GRHL1Q9NZI5 618 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 MYOTQ9UBF9 498 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 OPTCQ9UBM4 332 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 ZNF490Q9ULM2 529 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-202ENST00000381208 CLDN16Q9Y5I7 305 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 GTF3C1Q12789 2109 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 K7EPI3 171 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 KERAO60938 352 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 PIAS1O75925 651 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 TBX6O95947 436 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-202ENST00000381208 LTA4HP09960 611 aaKnown RBP12.08□□□□□ -0.48
RPAIN-202ENST00000381208 COX7A2P14406 83 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 PPP2R1BP30154 601 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 CASQ1P31415 396 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 PTGS2P35354 604 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 MSH2P43246 934 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 SLMAPQ14BN4 828 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 KBTBD12Q3ZCT8 623 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 TMEM211Q6ICI0 200 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 ARHGAP11AQ6P4F7 1023 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 CEP128Q6ZU80 1094 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 ISCA2Q86U28 154 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 LAS2Q8IYD9 372 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 RHEBL1Q8TAI7 183 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 AGAP11Q8TF27 550 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 ZNF473Q8WTR7 871 aaKnown RBP12.08□□□□□ -0.48
RPAIN-202ENST00000381208 UBTD2Q8WUN7 234 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 ASB15Q8WXK1 588 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 MTFMTQ96DP5 389 aaKnown RBP12.08□□□□□ -0.48
RPAIN-202ENST00000381208 CMTM7Q96FZ5 175 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 SGCZQ96LD1 299 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 ALOXE3Q9BYJ1 711 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 ALG9Q9H6U8 611 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 PRDM7Q9NQW5 492 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 COQ3Q9NZJ6 369 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 COPS7AQ9UBW8 275 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 TSC22D4Q9Y3Q8 395 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 ASB1Q9Y576 335 aa12.08□□□□□ -0.48
RPAIN-202ENST00000381208 A0A087X1B8 175 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ACOT7O00154 380 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 PRAMEF4O60810 478 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 C1QAP02745 245 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 SLC35E2BP0CK96 405 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 EPB42P16452 691 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 TNNI3P19429 210 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 CD22P20273 847 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 HIST1H1TP22492 207 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ATP5A1P25705 553 aaKnown RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 PIK3CBP42338 1070 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 MAGEA4P43358 317 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ST13P50502 369 aaKnown RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 HNRNPFP52597 415 aaKnown RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 GPX6P59796 221 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 PHEXP78562 749 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 TBL3Q12788 808 aaKnown RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 FAM83EQ2M2I3 478 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 PRAMEF9Q5VWM5 478 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 METTL2BQ6P1Q9 378 aaKnown RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 CCDC25Q86WR0 208 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 DOLPP1Q86YN1 238 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 SRRM1Q8IYB3 904 aaKnown RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 C17orf53Q8N3J3 647 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ACOT4Q8N9L9 421 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 GOLM1Q8NBJ4 401 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 PSD4Q8NDX1 1056 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 FAM57AQ8TBR7 257 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 FBXO25Q8TCJ0 367 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ESAMQ96AP7 390 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 REPS1Q96D71 796 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ART5Q96L15 291 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 F2RL3Q96RI0 385 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ATOH8Q96SQ7 321 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 KCMF1Q9P0J7 381 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ZNF223Q9UK11 482 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ACOT9Q9Y305 439 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 ANGPTL3Q9Y5C1 460 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms