RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CCL27Q9Y4X3 112 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 KLK4Q9Y5K2 254 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 A3GALT2U3KPV4 340 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 MYO10Q9HD67 2058 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 WASHC1A8K0Z3 465 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 PQBP1O60828 265 aaKnown RBP13.25□□□□□ -0.29
SDC1-202ENST00000381150 TP53P04637 393 aaPredicted RBP13.25□□□□□ -0.29
SDC1-202ENST00000381150 PSPHP78330 225 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 BCL2L1Q07817 233 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 HMGN2P46Q86SG4 172 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 FAM124AQ86V42 546 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 MEX3DQ86XN8 651 aaKnown RBP13.25□□□□□ -0.29
SDC1-202ENST00000381150 PTOV1Q86YD1 416 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 IQCF1Q8N6M8 205 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 TCEANCQ8N8B7 351 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 SETD6Q8TBK2 473 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 AP3M1Q9Y2T2 418 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 KIAA1671Q9BY89 1806 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 PRAMEF33A0A0G2JMD5 474 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 OR10H3O60404 316 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 PRAMEF10O60809 474 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 GADD45GO95257 159 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 SOD2P04179 222 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 PTGER3P43115 390 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 ACSM2AQ08AH3 577 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 LARS2Q15031 903 aaKnown RBP13.25□□□□□ -0.29
SDC1-202ENST00000381150 P2RY14Q15391 338 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 ACSM2BQ68CK6 577 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 NOXRED1Q6NXP6 359 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 DNAJB7Q7Z6W7 309 aaPredicted RBP13.25□□□□□ -0.29
SDC1-202ENST00000381150 GALNT6Q8NCL4 622 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 OR4M1Q8NGD0 313 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 SIPA1Q96FS4 1042 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 OPALINQ96PE5 141 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 DPCDQ9BVM2 203 aaPredicted RBP13.25□□□□□ -0.29
SDC1-202ENST00000381150 NXF2Q9GZY0 626 aaKnown RBP13.25□□□□□ -0.29
SDC1-202ENST00000381150 TBC1D17Q9HA65 648 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 GLTPQ9NZD2 209 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 NDUFAF4Q9P032 175 aa13.25□□□□□ -0.29
SDC1-202ENST00000381150 PIPSLA2A3N6 862 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 SAP18O00422 153 aaKnown RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 SERPINI2O75830 405 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 PDGFAP04085 211 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 ANXA5P08758 320 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 HIST1H2AGP0C0S8 130 aaPredicted RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 HIST1H2ADP20671 130 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 MRPL19P49406 292 aaKnown RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 GZMMP51124 257 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 ANKRD54Q6NXT1 300 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 FAHD1Q6P587 224 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 Q6ZNB5 142 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 DNAJC5GQ8N7S2 189 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 LSMEM1Q8N8F7 131 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 NFKBIDQ8NI38 313 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 MED8Q96G25 268 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 HIST1H2AHQ96KK5 128 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 HIST1H2AJQ99878 128 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 H2AFJQ9BTM1 129 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 C1QTNF6Q9BXI9 259 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 HHATLQ9HCP6 504 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 SCN8AQ9UQD0 1980 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 MGAT4DA6NG13 374 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 GAPDHSO14556 408 aaPredicted RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 FABP7O15540 132 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 TBL1XO60907 577 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 PRKAR1AP10644 381 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 DDCP20711 480 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 DGKAP23743 735 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 AVPR1BP47901 424 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 RPA4Q13156 261 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 MAB21L1Q13394 359 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 PLAG1Q6DJT9 500 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 CASP12Q6UXS9 341 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 PDZD3Q86UT5 571 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 RNF130Q86XS8 419 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 OR4A15Q8NGL6 344 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 ZNF431Q8TF32 576 aaPredicted RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 VOPP1Q96AW1 172 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 MAGEB10Q96LZ2 347 aaPredicted RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 GABARAPL1Q9H0R8 117 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 ZNF334Q9HCZ1 680 aaPredicted RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 POFUT2Q9Y2G5 429 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 TRBV5-3A0A0A0MS03 114 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 OLFM2O95897 454 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 PKLRP30613 574 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 HMGCLP35914 325 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 KCNJ10P78508 379 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 ZMYND11Q15326 602 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 ATAT1Q5SQI0 421 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 SLC35F1Q5T1Q4 408 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 OR2G6Q5TZ20 316 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 KIAA1841Q6NSI8 718 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 MZT2BQ6NZ67 158 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 HS6ST3Q8IZP7 471 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 RIT1Q92963 219 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 ART5Q96L15 291 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 PITX2Q99697 317 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms