RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SNRNP200O75643 2136 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 MAPK1P28482 360 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 GDI2P50395 445 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 EEFSECP57772 596 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 KCTD21Q4G0X4 260 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 AQP12AQ8IXF9 295 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 OR10G6Q8NH81 332 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 SLC17A9Q9BYT1 436 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 PAIP1Q9H074 479 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 RUBCNLQ9H714 662 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 AGPAT4Q9NRZ5 378 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 NARSO43776 548 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 LILRB5O75023 590 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 CHI3L1P36222 383 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 EIF2B2P49770 351 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 FCHO2Q0JRZ9 810 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 GBX1Q14549 363 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 LIPJQ5W064 366 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF551Q7Z340 670 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 TICAM1Q8IUC6 712 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF321PQ8N8H1 164 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 OR2L2Q8NH16 312 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 RPLP0P6Q8NHW5 317 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 ZC3H10Q96K80 434 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 ADI1Q9BV57 179 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 LMAN2LQ9H0V9 348 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 ING2Q9H160 280 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 SERHLQ9NQF3 203 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 MAGEL2Q9UJ55 1249 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 SPATA2Q9UM82 520 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 SNX11Q9Y5W9 270 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 ISM1B1AKI9 464 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 MAN1A2O60476 641 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ERAL1O75616 437 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PAPLNO95428 1278 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 IL3P08700 152 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 THEGLP0DJG4 465 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 C8orf89P0DMQ9 161 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 C1GALT1C1LP0DN25 315 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PRPS2P11908 318 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ETFAP13804 333 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ADH7P40394 386 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PIGFQ07326 219 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF385BQ569K4 471 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 CCNYL2Q5T2Q4 361 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 TNFAIP8L2Q6P589 184 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 MICU2Q8IYU8 434 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 IL17RCQ8NAC3 791 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF548Q8NEK5 533 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 WDR20Q8TBZ3 569 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 SPPL2AQ8TCT8 520 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 HM13Q8TCT9 377 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PATE1Q8WXA2 126 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 INSM2Q96T92 566 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 C17orf62Q9BQA9 187 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 YIPF4Q9BSR8 244 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 BDH2Q9BUT1 245 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 KAT8Q9H7Z6 458 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 TPT1P8Q9HAU6 139 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 FZD4Q9ULV1 537 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 HELZP42694 1942 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ASXL3Q9C0F0 2248 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 URB1O60287 2271 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 TSPAN11A1L157 253 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PRPS1L1P21108 318 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PRIM2P49643 509 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 RAB8AP61006 207 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 GRIK2Q13002 908 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 GAB1Q13480 694 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 COX20Q5RI15 118 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ABRAXAS1Q6UWZ7 409 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ZDHHC13Q8IUH4 622 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 GLB1L3Q8NCI6 653 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 TEX47Q8TBZ9 253 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ZUFSPQ96AP4 578 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PDXPQ96GD0 296 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 RUVBL1Q9Y265 456 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 TNRC18O15417 2968 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PTGES3LE9PB15 166 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 SLC16A5O15375 505 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ECDO95905 644 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ALBP02768 609 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 S100A9P06702 114 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 GGT1P19440 569 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 TCEA1P23193 301 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 HTR1EP28566 365 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 RPS9P46781 194 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ARHGDIAP52565 204 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 HBA1P69905 142 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 CLCA4Q14CN2 919 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 RUNDC3AQ59EK9 446 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF776Q68DI1 518 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 GRHL2Q6ISB3 625 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 RBM44Q6ZP01 1051 aaKnown RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 NAGSQ8N159 534 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 DPP10Q8N608 796 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 FAM160A2Q8N612 972 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 AMER3Q8N944 861 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 BTBD9Q96Q07 612 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms