RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 MANFP55145 182 aaKnown RBP16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 ARF3P61204 181 aaPredicted RBP16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 TGM3Q08188 693 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 NRF1Q16656 503 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 DEFB133Q30KQ1 61 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 C18orf63Q68DL7 685 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 GALNT10Q86SR1 603 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 RNF130Q86XS8 419 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 SLC47A1Q96FL8 570 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 TRAPPC9Q96Q05 1148 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 FAIM2Q9BWQ8 316 aa16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 SIRT3Q9NTG7 399 aaPredicted RBP16.45■□□□□ 0.22
THUMPD2-201ENST00000378727 SOCS2O14508 198 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 UBXN7O94888 489 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 DDX5P17844 614 aaKnown RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 UQCRC2P22695 453 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 CHI3L1P36222 383 aaPredicted RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 AFF3P51826 1226 aaKnown RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 VEZF1Q14119 521 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 OR10Q1Q8NGQ4 319 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 MAPKAP1Q9BPZ7 522 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 NTN4Q9HB63 628 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 SLC35C2Q9NQQ7 365 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 C1GALT1Q9NS00 363 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 ACSS1Q9NUB1 689 aaPredicted RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 SNX8Q9Y5X2 465 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 TMEM131Q92545 1883 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 C7orf72A4D263 438 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 ACOX3O15254 700 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 PROM1O43490 865 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 HCRTR1O43613 425 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 LDLRP01130 860 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 ST6GAL1P15907 406 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 IL1RNP18510 177 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 HOXA6P31267 233 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 KDELR2P33947 212 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 FNTBP49356 437 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 CDK9P50750 372 aaKnown RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 FOLH1Q04609 750 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 HSPB3Q12988 150 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 LRRC23Q53EV4 343 aaPredicted RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 WDR45BQ5MNZ6 344 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 ARMC6Q6NXE6 501 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 ZBTB49Q6ZSB9 765 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 ZCCHC10Q8TBK6 192 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 ZBED6CLQ96FA7 236 aaPredicted RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 UCK1Q9HA47 277 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 CES1P1Q9UKY3 287 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 OAZ3Q9UMX2 235 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 FAF1Q9UNN5 650 aaPredicted RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 MRPS2Q9Y399 296 aaKnown RBP16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 MAP4K5Q9Y4K4 846 aa16.44■□□□□ 0.22
THUMPD2-201ENST00000378727 RNF103-CHMP3A0A140T963 221 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 PDLIM1O00151 329 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 UPK1AO00322 258 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 B4GALT2O60909 372 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 GUCY1B2O75343 617 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 PIAS2O75928 621 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 PCGF2P35227 344 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 CRYBA2P53672 197 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 C21orf59P57076 290 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 FADDQ13158 208 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 MLC1Q15049 377 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 INTS11Q5TA45 600 aaKnown RBP16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 PPP4R4Q6NUP7 873 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 OGFOD3Q6PK18 319 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 EID3Q8N140 333 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 AVL9Q8NBF6 648 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 CAMKVQ8NCB2 501 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 PSMA8Q8TAA3 256 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 KLHL6Q8WZ60 621 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 PYURFQ96I23 114 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 VCXQ9H320 206 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 SEMA6CQ9H3T2 930 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 GLIPR2Q9H4G4 154 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 MAGIXQ9H6Y5 334 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 NEUROD4Q9HD90 331 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 FAM60AQ9NP50 221 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 LAMA1P25391 3075 aa16.43■□□□□ 0.22
THUMPD2-201ENST00000378727 CLOCKO15516 846 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 GCM2O75603 506 aaPredicted RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 PRSS23O95084 383 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 KRT75O95678 551 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 COL9A2Q14055 689 aaPredicted RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 DEFB134Q4QY38 66 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 SAXO2Q658L1 398 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 CBR4Q8N4T8 237 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 C11orf65Q8NCR3 313 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 RERGQ96A58 199 aaPredicted RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 ZNF597Q96LX8 424 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 AMDHD1Q96NU7 426 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 NLNQ9BYT8 704 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 ASPSCR1Q9BZE9 553 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 LYARQ9NX58 379 aaKnown RBP16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 CCDC163A0A0D9SF12 145 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 A0A1B0GVT2 93 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 A0A1W2PS29 197 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 LILRA5A6NI73 299 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 H0YJX3 145 aa16.42■□□□□ 0.22
THUMPD2-201ENST00000378727 DNAJB6O75190 326 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms