RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CACNG6Q9BXT2 260 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 WASH6PQ9NQA3 447 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 DIMT1Q9UNQ2 313 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TARDBPQ13148 414 aaKnown RBP eCLIP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 HLA-DQA1Q5Y7H0 255 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SLC36A4Q6YBV0 504 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF219Q9P2Y4 722 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 NEMP2A6NFY4 417 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TOR1AO14656 332 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SYPL2Q5VXT5 272 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CELF5Q8N6W0 485 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ALOXE3Q9BYJ1 711 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 OR5F1O95221 314 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 RASGRP1O95267 797 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CDK2P24941 298 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 OXTRP30559 389 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CYP4F8P98187 520 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SLC39A12Q504Y0 691 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GRHL2Q6ISB3 625 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 EDDM13A0A1B0GTR0 161 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 LRP5LA4QPB2 252 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TLR4O00206 839 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 HAS3O00219 553 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CKBP12277 381 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CLPPQ16740 277 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 NECTIN4Q96NY8 510 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 PCED1AQ9H1Q7 454 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 DDCP20711 480 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CD6P30203 668 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GLT8D1Q68CQ7 371 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 RGL4Q8IZJ4 473 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 H7C1Q1 480 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF254O75437 659 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 RFPL3O75679 317 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 DSTNP60981 165 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 MISPQ8IVT2 679 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF391Q9UJN7 358 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 LMO7Q8WWI1 1683 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GADD45AP24522 165 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TAS2R41P59536 307 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 AQP6Q13520 282 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 MELKQ14680 651 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 FAM76BQ5HYJ3 339 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 FAM122CQ6P4D5 195 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CSPG5O95196 566 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 NDUFV2P19404 249 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TCTE3Q8IZS6 198 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 LINC00615Q96LM1 132 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 MYADMQ96S97 322 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 PPA2Q9H2U2 334 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 RNF121Q9H920 327 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TRMT13Q9NUP7 481 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TDP1Q9NUW8 608 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ARHGEF28Q8N1W1 1705 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 LDB2O43679 373 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 C12orf40Q86WS4 652 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 LGI4Q8N135 537 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM125Q96AQ2 219 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 KLHL1Q9NR64 748 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CAMK2AQ9UQM7 478 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 UNC119BA6NIH7 251 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 KCNK5O95279 499 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 PVALBP20472 110 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 RPS15AP62244 130 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 UNC50Q53HI1 259 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TREML1Q86YW5 311 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZFAND1Q8TCF1 268 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GABARAPL3Q9BY60 117 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 EMC7Q9NPA0 242 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CLCA2Q9UQC9 943 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 OR6C65A6NJZ3 312 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CRABP1P29762 137 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SHKBP1Q8TBC3 707 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 FKBP7Q9Y680 259 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 RNF215Q9Y6U7 377 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 UBL3O95164 117 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 MTNR1BP49286 362 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SEMG2Q02383 582 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TCTE1Q5JU00 501 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SLC35D3Q5M8T2 416 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ARHGAP11AQ6P4F7 1023 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SSX8Q7RTT4 187 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 MECRQ9BV79 373 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 PRLP01236 227 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GDF10P55107 478 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GP2P55259 537 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 NRG3P56975 720 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TAS1R3Q7RTX0 852 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ATOH8Q96SQ7 321 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 OSMRQ99650 979 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF840PA6NDX5 716 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF780AO75290 641 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 DECR1Q16698 335 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 AKAP1Q92667 903 aaKnown RBP eCLIP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 FAM129BQ96TA1 746 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 A0A1W2PQ45 241 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 A0A1W2PQY0 241 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GPR1P46091 355 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SP3Q02447 781 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms