RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 FHP07954 510 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 CSNK2BP67870 215 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 TMEM52BQ4KMG9 183 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 CLEC12AQ5QGZ9 265 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 TMEM107Q6UX40 140 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 GTF2H4Q92759 462 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 ELSPBP1Q96BH3 223 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 MUS81Q96NY9 551 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 NELL2Q99435 816 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 TPK1Q9H3S4 243 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 PDE7BQ9NP56 450 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 DAPK2Q9UIK4 370 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 IST1P53990 364 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 TLR1Q15399 786 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 PHF19Q5T6S3 580 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 FAM109BQ6ICB4 259 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-202ENST00000377797 HMGN2P46Q86SG4 172 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 NAGSQ8N159 534 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 OR52N2Q8NGI0 321 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 METTL2AQ96IZ6 378 aaKnown RBP13.86□□□□□ -0.19
TCOF1-202ENST00000377797 EPHX3Q9H6B9 360 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 SMOXQ9NWM0 555 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 HCN4Q9Y3Q4 1203 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 IRGMA1A4Y4 181 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 RIIAD1A6NNX1 92 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 STX11O75558 287 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 SBK3P0C264 359 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 ITGADQ13349 1161 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 NFATC4Q14934 902 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 MEP1AQ16819 746 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 IQCCQ4KMZ1 466 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 PDZK1Q5T2W1 519 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 MLIPQ5VWP3 458 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 ZSWIM9Q86XI8 627 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 PLA2G15Q8NCC3 412 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 ZDHHC1Q8WTX9 485 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 UBTD2Q8WUN7 234 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 ART5Q96L15 291 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 YTHDF1Q9BYJ9 559 aaKnown RBP13.86□□□□□ -0.19
TCOF1-202ENST00000377797 OR6C2Q9NZP2 312 aa13.86□□□□□ -0.19
TCOF1-202ENST00000377797 EMC8O43402 210 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 NUDT6P53370 316 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ROR2Q01974 943 aaKnown RBP13.85□□□□□ -0.19
TCOF1-202ENST00000377797 PRDX1Q06830 199 aaKnown RBP13.85□□□□□ -0.19
TCOF1-202ENST00000377797 GPNMBQ14956 572 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 DEFB110Q30KQ9 67 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 CARM1Q86X55 608 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ZNF740Q8NDX6 193 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 OR5K2Q8NHB8 316 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 NETO1Q8TDF5 533 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 PIGKQ92643 395 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 MOAP1Q96BY2 351 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 OR51I1Q9H343 314 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 SATB2Q9UPW6 733 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 SCN10AQ9Y5Y9 1956 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 MCIDASD6RGH6 385 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ST3GAL3Q11203 375 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 KRR1Q13601 381 aaKnown RBP13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ADAMTSL4Q6UY14 1074 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 P2RY8Q86VZ1 359 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 EGFL6Q8IUX8 553 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 TDHQ8IZJ6 230 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 L3MBTL4Q8NA19 623 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 CIDECQ96AQ7 238 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-202ENST00000377797 CLMPQ9H6B4 373 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ZNF451Q9Y4E5 1061 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ACADLP28330 430 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 NPTX1Q15818 432 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 RUNDC3AQ59EK9 446 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 RBM48Q5RL73 367 aaKnown RBP13.85□□□□□ -0.19
TCOF1-202ENST00000377797 OR52E8Q6IFG1 317 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ANKFN1Q8N957 763 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 RELTQ969Z4 430 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ZFYVE21Q9BQ24 234 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 SPATA9Q9BWV2 254 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 OSBPL10Q9BXB5 764 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 OR8D2Q9GZM6 311 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 H0YIV9 168 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 PSIP1O75475 530 aaKnown RBP13.85□□□□□ -0.19
TCOF1-202ENST00000377797 RASAL1O95294 804 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 SOX14O95416 240 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 GGTA1PQ4G0N0 100 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 FUNDC1Q8IVP5 155 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 LRRC25Q8N386 305 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ATP6V1C2Q8NEY4 427 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 GRHL3Q8TE85 626 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 ALG14Q96F25 216 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 C5orf34Q96MH7 638 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 UCK2Q9BZX2 261 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 OR51V1Q9H2C8 321 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 PRTFDC1Q9NRG1 225 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 TM7SF3Q9NS93 570 aa13.85□□□□□ -0.19
TCOF1-202ENST00000377797 TARM1B6A8C7 271 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 C1QAP02745 245 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 PSMA1P25786 263 aaKnown RBP13.84□□□□□ -0.19
TCOF1-202ENST00000377797 IGFALSP35858 605 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 RGNQ15493 299 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 SLCO4C1Q6ZQN7 724 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 C19orf18Q8NEA5 215 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms