RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ZNF717Q9BY31 904 aaPredicted RBP15.77■□□□□ 0.12
TRIM39-201ENST00000376656 C1GALT1Q9NS00 363 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 REV1Q9UBZ9 1251 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 DSPPQ9NZW4 1301 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 AGAP14A8MT82 685 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 FFAR1O14842 300 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 IL1AP01583 271 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 SDC2P34741 201 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 EEF1A2Q05639 463 aaKnown RBP15.77■□□□□ 0.11
TRIM39-201ENST00000376656 MLLT11Q13015 90 aaPredicted RBP15.77■□□□□ 0.11
TRIM39-201ENST00000376656 TNK1Q13470 666 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 MEDAGQ5VYS4 303 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 SERPINA13PQ6UXR4 307 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 CAMKMTQ7Z624 323 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 OR52N2Q8NGI0 321 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 CIDECQ96AQ7 238 aaPredicted RBP15.77■□□□□ 0.11
TRIM39-201ENST00000376656 MAP6Q96JE9 813 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 TSSK6Q9BXA6 273 aa15.77■□□□□ 0.11
TRIM39-201ENST00000376656 RNASET2O00584 256 aaKnown RBP15.76■□□□□ 0.11
TRIM39-201ENST00000376656 MYCP01106 439 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-201ENST00000376656 GBAP04062 536 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 SNRPGP62308 76 aaKnown RBP15.76■□□□□ 0.11
TRIM39-201ENST00000376656 FLYWCH1Q4VC44 716 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 DDI2Q5TDH0 399 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 LCN1P1Q5VSP4 162 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 SYT14Q8NB59 555 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 NELL2Q99435 816 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 SGK2Q9HBY8 427 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 FAM8A1Q9UBU6 413 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 MALT1Q9UDY8 824 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 OR2B3O76000 313 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 CYP2A6P11509 494 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-201ENST00000376656 MAP2K3P46734 347 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 CAV3P56539 151 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 FCHO2Q0JRZ9 810 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 HECTD3Q5T447 861 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 LAMTOR1Q6IAA8 161 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 CELF5Q8N6W0 485 aaKnown RBP15.76■□□□□ 0.11
TRIM39-201ENST00000376656 TRPV1Q8NER1 839 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 PROKR2Q8NFJ6 384 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 TTC9Q92623 222 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 OR51B4Q9Y5P0 310 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 HELZP42694 1942 aaKnown RBP15.76■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF840PA6NDX5 716 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 GFYI3L273 518 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 MYL12BO14950 172 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 LGI1O95970 557 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 C1QBP02746 253 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 RHCEP18577 417 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 PKLRP30613 574 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 LIM2P55344 173 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 THOC6Q86W42 341 aaKnown RBP15.76■□□□□ 0.11
TRIM39-201ENST00000376656 TMC8Q8IU68 726 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 CLDN22Q8N7P3 220 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 TCEANCQ8N8B7 351 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 PLD4Q96BZ4 506 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 MOSPD1Q9UJG1 213 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 TMCC3Q9ULS5 477 aa15.76■□□□□ 0.11
TRIM39-201ENST00000376656 OR56A5P0C7T3 313 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 OSMP13725 252 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 AKR1A1P14550 325 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 CCL23P55773 120 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 MC1RQ01726 317 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 RBBP4Q09028 425 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 SEC23BQ15437 767 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 CRB2Q5IJ48 1285 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 TIGD3Q6B0B8 471 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 CRTC1Q6UUV9 634 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 CEACAM20Q6UY09 585 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 USP30Q70CQ3 517 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 ZBED6CLQ96FA7 236 aaPredicted RBP15.75■□□□□ 0.11
TRIM39-201ENST00000376656 NIPAL2Q9H841 368 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 HEPACAM2A8MVW5 462 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 H3BN98 237 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 MTX2O75431 263 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF8P17098 575 aaPredicted RBP15.75■□□□□ 0.11
TRIM39-201ENST00000376656 UQCRC1P31930 480 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 TARDBPQ13148 414 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRIM39-201ENST00000376656 PUM1Q14671 1186 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRIM39-201ENST00000376656 SLC5A12Q1EHB4 618 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 TMEM201Q5SNT2 666 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 APCDD1Q8J025 514 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 CBARPQ8N350 705 aaPredicted RBP15.75■□□□□ 0.11
TRIM39-201ENST00000376656 SAMD11Q96NU1 681 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 DHRS9Q9BPW9 319 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 HDHD5Q9BXW7 423 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 ARHGAP39Q9C0H5 1083 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 KLHL42Q9P2K6 505 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 NLKQ9UBE8 527 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 TEKT2Q9UIF3 430 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 RPL36Q9Y3U8 105 aaKnown RBP15.75■□□□□ 0.11
TRIM39-201ENST00000376656 HSPB11Q9Y547 144 aa15.75■□□□□ 0.11
TRIM39-201ENST00000376656 IFNW1P05000 195 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 SLC9A3P48764 834 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 C1DQ13901 141 aaKnown RBP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 ELOAQ14241 798 aaKnown RBP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 NFE2L1Q14494 772 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 RTP2Q5QGT7 225 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 FOXJ1Q92949 421 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 MED8Q96G25 268 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms