RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 SLC31A1O15431 190 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 CLPXO76031 633 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 KAT7O95251 611 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 MAGP20916 626 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 PCGF2P35227 344 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
CPT1A-202ENST00000376618 IFITM3Q01628 133 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 EPS8Q12929 822 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 SYPL1Q16563 259 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 RD3Q7Z3Z2 195 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 IGFN1Q86VF2 1251 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 C17orf64Q86WR6 236 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 HDDC3Q8N4P3 179 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 TMCO5AQ8N6Q1 288 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 TMIEQ8NEW7 156 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 FBLIM1Q8WUP2 373 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 RAD51AP1Q96B01 352 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 TEFMQ96QE5 360 aaKnown RBP13.35□□□□□ -0.27
CPT1A-202ENST00000376618 ZNF300Q96RE9 604 aaPredicted RBP13.35□□□□□ -0.27
CPT1A-202ENST00000376618 BHLHE41Q9C0J9 482 aaPredicted RBP13.35□□□□□ -0.27
CPT1A-202ENST00000376618 MIR1-1HGQ9H1L0 117 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 ACER3Q9NUN7 267 aa13.35□□□□□ -0.27
CPT1A-202ENST00000376618 ZFR2Q9UPR6 939 aaKnown RBP13.35□□□□□ -0.27
CPT1A-202ENST00000376618 ARHGEF17Q96PE2 2063 aaPredicted RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 SH3PXD2BA1X283 911 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 RGS10O43665 173 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 ERAL1O75616 437 aaKnown RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 CHRM5P08912 532 aaPredicted RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 HNRNPA1P09651 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 IL1RNP18510 177 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 TTKP33981 857 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 EEF1A2Q05639 463 aaKnown RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 DUSP2Q05923 314 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 CYP2A13Q16696 494 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 UBE3DQ7Z6J8 389 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 PDZD3Q86UT5 571 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 TSPYL5Q86VY4 417 aaPredicted RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 OR52N2Q8NGI0 321 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 MENTQ9BUN1 341 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 SERHL2Q9H4I8 314 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 C11orf16Q9NQ32 467 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 ZNF226Q9NYT6 803 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 PCDHGB3Q9Y5G1 929 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 TRIM64BA6NI03 449 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 FOXE1O00358 373 aaPredicted RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 NADKO95544 446 aaPredicted RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 CCDC159P0C7I6 412 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 HSD3B1P14060 373 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 FCARP24071 287 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 HSD3B2P26439 372 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 BSGP35613 385 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 PHEXP78562 749 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 SEC23BQ15437 767 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 MAPK11Q15759 364 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 DEF8Q6ZN54 512 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 MSANTD1Q6ZTZ1 278 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 SIMC1Q8NDZ2 872 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 XAGE5Q8WWM1 108 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 APOL4Q9BPW4 351 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 COPS4Q9BT78 406 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 ZCCHC2Q9C0B9 1178 aaKnown RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 WBP1LQ9NX94 342 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 NFKBIL1Q9UBC1 381 aaPredicted RBP13.34□□□□□ -0.27
CPT1A-202ENST00000376618 AP3M1Q9Y2T2 418 aa13.34□□□□□ -0.27
CPT1A-202ENST00000376618 LOC100506127A0A0U1RQW1 187 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 PI15O43692 258 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 NFATC1O95644 943 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 FGF19O95750 216 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 EML2O95834 649 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 CD36P16671 472 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 ITIH1P19827 911 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 RAB8AP61006 207 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 IRF4Q15306 451 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 GPR19Q15760 415 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 IFI44LQ53G44 452 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 KHDRBS2Q5VWX1 349 aaKnown RBP13.33□□□□□ -0.28
CPT1A-202ENST00000376618 PARM1Q6UWI2 310 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 ZNF793Q6ZN11 406 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 CAMKMTQ7Z624 323 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 AQP11Q8NBQ7 271 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 GGHQ92820 318 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 TMEM19Q96HH6 336 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
CPT1A-202ENST00000376618 GABARAPL1Q9H0R8 117 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 GPN2Q9H9Y4 310 aaPredicted RBP13.33□□□□□ -0.28
CPT1A-202ENST00000376618 SCN3BQ9NY72 215 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 SPHK1Q9NYA1 384 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 SCHIP1Q9P0W5 487 aaPredicted RBP13.33□□□□□ -0.28
CPT1A-202ENST00000376618 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
CPT1A-202ENST00000376618 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 PSMD11O00231 422 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 PGRMC2O15173 223 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 FRS3O43559 492 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 DNTTP04053 509 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 OR12D1P0DN82 309 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 LBX1P52954 281 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 CLDN2P57739 230 aa13.33□□□□□ -0.28
CPT1A-202ENST00000376618 RPS3AP61247 264 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms