RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ARL14Q8N4G2 192 aa16.77■□□□□ 0.27
CTTN-203ENST00000376561 CBR4Q8N4T8 237 aa16.77■□□□□ 0.27
CTTN-203ENST00000376561 UTP15Q8TED0 518 aaKnown RBP16.77■□□□□ 0.27
CTTN-203ENST00000376561 TMEM121BQ9BXQ6 578 aaPredicted RBP16.77■□□□□ 0.27
CTTN-203ENST00000376561 NLNQ9BYT8 704 aa16.77■□□□□ 0.27
CTTN-203ENST00000376561 ACSS1Q9NUB1 689 aaPredicted RBP16.77■□□□□ 0.27
CTTN-203ENST00000376561 SNX11Q9Y5W9 270 aa16.77■□□□□ 0.27
CTTN-203ENST00000376561 AP4B1Q9Y6B7 739 aa16.77■□□□□ 0.27
CTTN-203ENST00000376561 GLOD5A6NK44 160 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 WASHC1A8K0Z3 465 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 ACOX3O15254 700 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 P2RX6O15547 441 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 DENRO43583 198 aaKnown RBP16.76■□□□□ 0.27
CTTN-203ENST00000376561 CSNK1EP49674 416 aaKnown RBP16.76■□□□□ 0.27
CTTN-203ENST00000376561 HNRNPKP61978 463 aaKnown RBP eCLIP16.76■□□□□ 0.27
CTTN-203ENST00000376561 VAC14Q08AM6 782 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 HSPB3Q12988 150 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 FRMPD2BQ6IN97 320 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 GALNT10Q86SR1 603 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 PACRGLQ8N7B6 248 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 C11orf65Q8NCR3 313 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 VPS50Q96JG6 964 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 NR1H4Q96RI1 486 aaPredicted RBP16.76■□□□□ 0.27
CTTN-203ENST00000376561 RAD21L1Q9H4I0 556 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 EPS8L2Q9H6S3 715 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 NTN4Q9HB63 628 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 SLC35C2Q9NQQ7 365 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 C1GALT1Q9NS00 363 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 MAP4K5Q9Y4K4 846 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 LOC105369274A0A096LPK9 316 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 LOC102723532A0A0G2JNH3 316 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 RNF103-CHMP3A0A140T963 221 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 PRSS23O95084 383 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 ZNF682O95780 498 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 AIFM1O95831 613 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 HOXB6P17509 224 aaKnown RBP16.76■□□□□ 0.27
CTTN-203ENST00000376561 PCGF2P35227 344 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 SNRPNP63162 240 aaKnown RBP16.76■□□□□ 0.27
CTTN-203ENST00000376561 MLC1Q15049 377 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 ARMC6Q6NXE6 501 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 SPRED1Q7Z699 444 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 OR4N4Q8N0Y3 316 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 AVL9Q8NBF6 648 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 CAMKVQ8NCB2 501 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 OR10Q1Q8NGQ4 319 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 GATA6Q92908 595 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 IER2Q9BTL4 223 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 DUSP15Q9H1R2 295 aaPredicted RBP16.76■□□□□ 0.27
CTTN-203ENST00000376561 Q9H521 79 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 SIRT3Q9NTG7 399 aaPredicted RBP16.76■□□□□ 0.27
CTTN-203ENST00000376561 SCN3AQ9NY46 2000 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 RPS6KA6Q9UK32 745 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 POMT2Q9UKY4 750 aa16.76■□□□□ 0.27
CTTN-203ENST00000376561 PGRMC2O15173 223 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 VILLO15195 856 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 AQP9O43315 295 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 NOBOXO60393 691 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 SMIM10L1P0DMW3 83 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 TEAD4Q15561 434 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 GCNT6Q5T4J0 391 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 C18orf63Q68DL7 685 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 RNF44Q7L0R7 432 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 SMIM10Q96HG1 83 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 LYARQ9NX58 379 aaKnown RBP16.75■□□□□ 0.27
CTTN-203ENST00000376561 THEGQ9P2T0 379 aa16.75■□□□□ 0.27
CTTN-203ENST00000376561 URADA6NGE7 173 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 EIF4E1BA6NMX2 242 aaKnown RBP16.74■□□□□ 0.27
CTTN-203ENST00000376561 H0YGG7 62 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 UPK1AO00322 258 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 PROM1O43490 865 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 SH3BP5O60239 455 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 CDK9P50750 372 aaKnown RBP16.74■□□□□ 0.27
CTTN-203ENST00000376561 ARF3P61204 181 aaPredicted RBP16.74■□□□□ 0.27
CTTN-203ENST00000376561 SUZ12Q15022 739 aaKnown RBP16.74■□□□□ 0.27
CTTN-203ENST00000376561 C6orf52Q5T4I8 152 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 CBLL1Q75N03 491 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 PSMA8Q8TAA3 256 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 ZCCHC10Q8TBK6 192 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 RERGQ96A58 199 aaPredicted RBP16.74■□□□□ 0.27
CTTN-203ENST00000376561 NEURL3Q96EH8 262 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 MAPKAP1Q9BPZ7 522 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 GLIPR2Q9H4G4 154 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 TMEM38AQ9H6F2 299 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 DLGAP2Q9P1A6 1054 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 ZNF639Q9UID6 485 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 TP53BP1Q12888 1972 aaPredicted RBP16.74■□□□□ 0.27
CTTN-203ENST00000376561 LMO7DNF2Z398 122 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 BCAT2O15382 392 aaPredicted RBP16.74■□□□□ 0.27
CTTN-203ENST00000376561 UBXN7O94888 489 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 RASAL1O95294 804 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 CST1P01037 141 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 ZNF23P17027 643 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 PRIM2P49643 509 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 RBBP4Q09028 425 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 SAXO2Q658L1 398 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 MAMSTRQ6ZN01 415 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 EIF3MQ7L2H7 374 aaKnown RBP16.74■□□□□ 0.27
CTTN-203ENST00000376561 AMDHD1Q96NU7 426 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 ROGDIQ9GZN7 287 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 SEMA6CQ9H3T2 930 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms