RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 HMGB1P1B2RPK0 211 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 B4GALT2O60909 372 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 C2P06681 752 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 HOXD4P09016 255 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 CDH1P12830 882 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 TRHRP34981 398 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 GGT5P36269 586 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 KCNC1P48547 511 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 PRRC2AP48634 2157 aaKnown RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 SERPINB9P50453 376 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 HLCSP50747 726 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 CCR8P51685 355 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 NUP107P57740 925 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 ZNF844Q08AG5 666 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 PMPCAQ10713 525 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 DLG1Q12959 904 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 OR4D1Q15615 310 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 AGBL2Q5U5Z8 902 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 TMEM211Q6ICI0 200 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 FRA10AC1Q70Z53 315 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 THOC6Q86W42 341 aaKnown RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 GPSM1Q86YR5 675 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 TGIF2LYQ8IUE0 185 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 TCAIMQ8N3R3 496 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 POGLUT1Q8NBL1 392 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 ZNF740Q8NDX6 193 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 OR52N2Q8NGI0 321 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 STAG3L4Q8TBR4 150 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 TBC1D20Q96BZ9 403 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 MTBPQ96DY7 904 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 MRRFQ96E11 262 aaKnown RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 EGFL8Q99944 293 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 TP63Q9H3D4 680 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 GSX1Q9H4S2 264 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 NMRAL1Q9HBL8 299 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 CCM2LQ9NUG4 571 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 KCNN3Q9UGI6 736 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 SLC22A14Q9Y267 594 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 SLC22A7Q9Y694 548 aa12.24□□□□□ -0.45
CLCN6-205ENST00000376492 MAP1AP78559 2803 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-205ENST00000376492 A0A087X1B8 175 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 SAGE2PA6NJ88 616 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 CHST10O43529 356 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 PEX1O43933 1283 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 PRMT3O60678 531 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 ZWINTO95229 277 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 ALDOAP04075 364 aaKnown RBP12.23□□□□□ -0.45
CLCN6-205ENST00000376492 INHBAP08476 426 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 LTA4HP09960 611 aaKnown RBP12.23□□□□□ -0.45
CLCN6-205ENST00000376492 KLK2P20151 261 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 MAOAP21397 527 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 GRK3P35626 688 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 SLC6A12P48065 614 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 BTG2P78543 158 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 DEFB134Q4QY38 66 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 CES4AQ5XG92 561 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 SULT1C3Q6IMI6 304 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 TAOK1Q7L7X3 1001 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 MDGA2Q7Z553 956 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 TBC1D1Q86TI0 1168 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-205ENST00000376492 AFAP1L2Q8N4X5 818 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 MFSD9Q8NBP5 474 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 SLC5A11Q8WWX8 675 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 NEIL2Q969S2 332 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 ISL2Q96A47 359 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 PAFAH2Q99487 392 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 FOXC2Q99958 501 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 LIME1Q9H400 295 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 TMBIM4Q9HC24 238 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 SNX15Q9NRS6 342 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 PSMC3IPQ9P2W1 217 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-205ENST00000376492 PTBP2Q9UKA9 531 aaKnown RBP12.23□□□□□ -0.45
CLCN6-205ENST00000376492 KCNE2Q9Y6J6 123 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 IKBKGQ9Y6K9 419 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 INTS1Q8N201 2190 aaKnown RBP12.23□□□□□ -0.45
CLCN6-205ENST00000376492 GTF3C1Q12789 2109 aa12.23□□□□□ -0.45
CLCN6-205ENST00000376492 A0A096LPK6 155 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 A8MUA0 341 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 KLRC4-KLRK1H3BQV0 150 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 CDK2AP1O14519 115 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 TAPBPO15533 448 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 NDUFS4O43181 175 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 GALR3O60755 368 aaPredicted RBP12.22□□□□□ -0.45
CLCN6-205ENST00000376492 SLC35G6P0C7Q6 338 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 IL10P22301 178 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 JAK1P23458 1154 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 TYK2P29597 1187 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 GMPRP36959 345 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 MSH2P43246 934 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 MAGEA12P43365 314 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 SERPINB8P50452 374 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 MEF2AQ02078 507 aaPredicted RBP12.22□□□□□ -0.45
CLCN6-205ENST00000376492 HYAL2Q12891 473 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 HERC3Q15034 1050 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 CEBPEQ15744 281 aa12.22□□□□□ -0.45
CLCN6-205ENST00000376492 FAM83EQ2M2I3 478 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms