RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 UGT2B17O75795 530 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 IGSF6O95976 241 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 MPC1LP0DKB6 136 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 ZNF8P17098 575 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 IRS1P35568 1242 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 ASMTP46597 345 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 AP1S2P56377 157 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 CDK6Q00534 326 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 TEKQ02763 1124 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 SHHQ15465 462 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 SLC5A12Q1EHB4 618 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 Q5BKY6 102 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 SNAP47Q5SQN1 464 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 PLPP4Q5VZY2 271 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 TPGS2Q68CL5 300 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 AGTRAPQ6RW13 159 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 NLRP8Q86W28 1048 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 CHTF18Q8WVB6 975 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 C3orf14Q9HBI5 128 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 C1GALT1Q9NS00 363 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 THSD1Q9NS62 852 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 NUFIP1Q9UHK0 495 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 STOML2Q9UJZ1 356 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 KLHL20Q9Y2M5 609 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 TRANK1O15050 2925 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 TRBC2A0A5B9 178 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 SMIM30A4D0T7 59 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 SCO2O43819 266 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 GREM1O60565 184 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 CYP17A1P05093 508 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 SCG5P05408 212 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 SRCP12931 536 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 PCSK2P16519 638 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 DDOSTP39656 456 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 CRYBB2P43320 205 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 LIMS1P48059 325 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 LMAN2Q12907 356 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 CAMK1Q14012 370 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 DUSP7Q16829 419 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 PRSS53Q2L4Q9 553 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 MPEG1Q2M385 716 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 TOR1AIP1Q5JTV8 583 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 TXNDC8Q6A555 127 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 OR2AP1Q8NGE2 309 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 POF1BQ8WVV4 589 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 OVCA2Q8WZ82 227 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 RANGRFQ9HD47 186 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 ASAH2Q9NR71 780 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 CNOT2Q9NZN8 540 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 GRIP1Q9Y3R0 1128 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 INSL5Q9Y5Q6 135 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 PRRC2BQ5JSZ5 2229 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 TRBV4-1A0A0J9YWV2 114 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 SH3D21A4FU49 640 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 EIF3FO00303 357 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 RNASET2O00584 256 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 CSO75390 466 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 RECKO95980 971 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 CSF2P04141 144 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 ITGA2P17301 1181 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 PTX3P26022 381 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 PREPP48147 710 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 RORCP51449 518 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 CLPPQ16740 277 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 FAM214AQ32MH5 1076 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 COL13A1Q5TAT6 717 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 TMEM150AQ86TG1 271 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 SLC44A2Q8IWA5 706 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 ZFYVE19Q96K21 471 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 MAPKAP1Q9BPZ7 522 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 SRRQ9GZT4 340 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 ZNF334Q9HCZ1 680 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 TMA7Q9Y2S6 64 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 LSM2Q9Y333 95 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 H0YIV9 168 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 FFAR1O14842 300 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 GRM6O15303 877 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 CA3P07451 260 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 CLEC2LP0C7M8 214 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 TIA1P31483 386 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 BDKRB1P46663 353 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 EEF1A2Q05639 463 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 TSTA3Q13630 321 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 SPHARQ15513 63 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 PLEKHS1Q5SXH7 462 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 GRHL2Q6ISB3 625 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 OR52N2Q8NGI0 321 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 SPPL3Q8TCT6 385 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 GEMIN6Q8WXD5 167 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 TMEM203Q969S6 136 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 LYSMD1Q96S90 227 aa13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 ZNF106Q9H2Y7 1883 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 STOX2Q9P2F5 926 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-202ENST00000375692 NOTOA8MTQ0 251 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 PLD2O14939 933 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SLC16A5O15375 505 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SGTAO43765 313 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms