RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 RPL36Q9Y3U8 105 aaKnown RBP13.16□□□□□ -0.3
MCF2L-204ENST00000375608 CCL27Q9Y4X3 112 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 PIKFYVEQ9Y2I7 2098 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 TRBV4-1A0A0J9YWV2 114 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 HMX3A6NHT5 357 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 RAB14P61106 215 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 AP1S1P61966 158 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 GPLD1P80108 840 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 RING1Q06587 406 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 E2F2Q14209 437 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 OR2A14Q96R47 310 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 NELL2Q99435 816 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 TTTY10Q9BZA0 68 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 NAALAD2Q9Y3Q0 740 aa13.16□□□□□ -0.3
MCF2L-204ENST00000375608 CFAP20Q9Y6A4 193 aaKnown RBP13.16□□□□□ -0.3
MCF2L-204ENST00000375608 CD8B2A6NJW9 211 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 INMT-MINDY4F8WBC2 141 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 KPNA3O00505 521 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 YY2O15391 372 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 DUSP11O75319 330 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 C8GP07360 202 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 CD8BP10966 210 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 GPX2P18283 190 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 SNRPD1P62314 119 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 PTSQ03393 145 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 LRRC32Q14392 662 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 KLHL12Q53G59 568 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 MED27Q6P2C8 311 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 SMARCD3Q6STE5 483 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 SERINC5Q86VE9 423 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 PEX5LQ8IYB4 626 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 CMTM8Q8IZV2 173 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 VWA5B2Q8N398 1253 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 DBF4BQ8NFT6 615 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 USP7Q93009 1102 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 EPYCQ99645 322 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 CHIAQ9BZP6 476 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 PPIL3Q9H2H8 161 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 MAU2Q9Y6X3 613 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 DOCK1Q14185 1865 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 H7C4K7 107 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 SCAMP2O15127 329 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 SSNA1O43805 119 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 TSPAN9O75954 239 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 OAZ2O95190 189 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 JUPP14923 745 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 DSTNP60981 165 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 ABATP80404 500 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 MAP4K2Q12851 820 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 IRF3Q14653 427 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 DUSP7Q16829 419 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 Q6ZVU0 165 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 ABI3BPQ7Z7G0 1075 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 RBM45Q8IUH3 476 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 MSANTD3Q96H12 275 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 WRAP53Q9BUR4 548 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 KCNK12Q9HB15 430 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 CCDC59Q9P031 241 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 B4GALT6Q9UBX8 382 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 PLAGL1Q9UM63 463 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 GLOD5A6NK44 160 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 H3BQ06 376 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 SLC11A1P49279 550 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 RPL6Q02878 288 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 GPR17Q13304 367 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 GPR33Q49SQ1 333 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 FLYWCH1Q4VC44 716 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 CD300LGQ6UXG3 332 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 PDZD3Q86UT5 571 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 POP5Q969H6 163 aaKnown RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 TESCQ96BS2 214 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 MAPKAP1Q9BPZ7 522 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 MND1Q9BWT6 205 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.15□□□□□ -0.33e-6■■■■□ 19.8
MCF2L-204ENST00000375608 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 GALNT9Q9HCQ5 603 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 GULP1Q9UBP9 304 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 MBD1Q9UIS9 605 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-204ENST00000375608 TBC1D24Q9ULP9 559 aa13.15□□□□□ -0.3
MCF2L-204ENST00000375608 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-204ENST00000375608 ZNF840PA6NDX5 716 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 ORC5O43913 435 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 HPGDSO60760 199 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 SERPINI2O75830 405 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 URODP06132 367 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 H1F0P07305 194 aaKnown RBP13.14□□□□□ -0.31
MCF2L-204ENST00000375608 ATP1B2P14415 290 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-204ENST00000375608 PPM1FP49593 454 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-204ENST00000375608 RNF144AP50876 292 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-204ENST00000375608 DBPQ10586 325 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-204ENST00000375608 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
MCF2L-204ENST00000375608 CNIH2Q6PI25 160 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 IQCHQ86VS3 1027 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 MMP21Q8N119 569 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 OR7G3Q8NG95 312 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 PDLIM5Q96HC4 596 aaKnown RBP13.14□□□□□ -0.31
MCF2L-204ENST00000375608 ST6GAL2Q96JF0 529 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 FCRL4Q96PJ5 515 aa13.14□□□□□ -0.31
MCF2L-204ENST00000375608 SLC22A12Q96S37 553 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms