RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 A0A0C4DFX4 3053 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 SMAD6O43541 496 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PTP4A3O75365 173 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 RPS17P08708 135 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PRSS56P0CW18 603 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 HOXB8P17481 243 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 CTPS1P17812 591 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PTX3P26022 381 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PRDX3P30048 256 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 HOXC13P31276 330 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 CLCN4P51793 760 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 ERVK-21P61565 698 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 EXOSC2Q13868 293 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 NR6A1Q15406 480 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 DDI2Q5TDH0 399 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PM20D2Q8IYS1 436 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 OR56A4Q8NGH8 313 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 TSGA13Q96PP4 275 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 OR5M11Q96RB7 305 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 MARVELD1Q9BSK0 173 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 DPCDQ9BVM2 203 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 GABARAPL3Q9BY60 117 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 ACTL8Q9H568 366 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 POLMQ9NP87 494 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 CUEDC1Q9NWM3 386 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PHF11Q9UIL8 331 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 POLR3HQ9Y535 204 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 KNL1Q8NG31 2342 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 DRGXA6NNA5 263 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 INMT-MINDY4F8WBC2 141 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 H3BM21 787 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 KHNYNO15037 678 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 KERAO60938 352 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 DIRAS1O95057 198 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PEX11BO96011 259 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 CTSOP43234 321 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 CLCNKAP51800 687 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 COL13A1Q5TAT6 717 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 BICRALQ6AI39 1079 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 GPRIN3Q6ZVF9 776 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 GALNT10Q86SR1 603 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PHACTR4Q8IZ21 702 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 FANK1Q8TC84 345 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 SMG7Q92540 1137 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PDXPQ96GD0 296 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 SORCS2Q96PQ0 1159 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 KCNC2Q96PR1 638 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 PBX4Q9BYU1 374 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 MTG2Q9H4K7 406 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 FOLH1BQ9HBA9 442 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 SLC35C2Q9NQQ7 365 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 THUMPD1Q9NXG2 353 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 SLC39A1Q9NY26 324 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 FNIP2Q9P278 1114 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 BAIAP2Q9UQB8 552 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 ARL5AQ9Y689 179 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 A0A1W2PQL4 384 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 PCDH17O14917 1159 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 CCNDBP1O95273 360 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 SLC2A2P11168 524 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 FDXRP22570 491 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 PSMA1P25786 263 aaKnown RBP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 HOXD9P28356 352 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 CD70P32970 193 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 IDH2P48735 452 aaKnown RBP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 INPP1P49441 399 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 CDH4P55283 916 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 Q6ZSR9 355 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 LUZP2Q86TE4 346 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 GLCCI1Q86VQ1 547 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 CACUL1Q86Y37 369 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 SLC34A3Q8N130 599 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 ST8SIA2Q92186 375 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 TBATAQ96M53 351 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 RAD18Q9NS91 495 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 SEC14L4Q9UDX3 406 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 ADAM30Q9UKF2 790 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 CRYL1Q9Y2S2 319 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF670-ZNF695F2Z2N8 137 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 LYRM1O43325 122 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 CLDN11O75508 207 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 OR4F21O95013 312 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 S1PR4O95977 384 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 RHOAP61586 193 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 POLR2GP62487 172 aaKnown RBP eCLIP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 HSF2Q03933 536 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 PCDH1Q08174 1060 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 SSX1Q16384 188 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF284Q2VY69 593 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 FBXO48Q5FWF7 155 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 OR4F3Q6IEY1 312 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 RETSATQ6NUM9 610 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 DENND6BQ8NEG7 585 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 PCNPQ8WW12 178 aaKnown RBP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 UPRTQ96BW1 309 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 PLD4Q96BZ4 506 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 SECISBP2Q96T21 854 aaKnown RBP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 CDCA4Q9BXL8 241 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 POLR1EQ9GZS1 481 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms