RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PCDHGB3Q9Y5G1 929 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 POM121BA6NF01 834 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 C4orf51C9J302 202 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 PCDH17O14917 1159 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 PDPK1O15530 556 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 PCMT1P22061 227 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ALDH4A1P30038 563 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 TTKP33981 857 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 KRT20P35900 424 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 RPL3P39023 403 aaKnown RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 NUP107P57740 925 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ARHGAP19Q14CB8 494 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF750Q32MQ0 723 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ANKRD54Q6NXT1 300 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 FAHD1Q6P587 224 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 DGLUCYQ7Z3D6 616 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 LSRQ86X29 649 aaPredicted RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 NLGN4XQ8N0W4 816 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 FBXL6Q8N531 539 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 TMEM145Q8NBT3 493 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 OR10G2Q8NGC3 310 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 OR52E1Q8NGJ3 308 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF420Q8TAQ5 688 aaPredicted RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 TANKQ92844 425 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 DOK1Q99704 481 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 PELI2Q9HAT8 420 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 FGF22Q9HCT0 170 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 TRBC2A0A5B9 178 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 NARSO43776 548 aaKnown RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 FAM20BO75063 409 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 EML2O95834 649 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 JUNBP17275 347 aaPredicted RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 CCNA2P20248 432 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 SSR2P43308 183 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 RPS21P63220 83 aaKnown RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 NFATC3Q12968 1075 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 MAD2L1BPQ15013 274 aaPredicted RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ATAT1Q5SQI0 421 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF793Q6ZN11 406 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 SETD9Q8NE22 299 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 GIPC3Q8TF64 312 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 POP5Q969H6 163 aaKnown RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 GTPBP3Q969Y2 492 aaKnown RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 NRBF2Q96F24 287 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF300Q96RE9 604 aaPredicted RBP15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 EPYCQ99645 322 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 ACSL5Q9ULC5 683 aa15.2■□□□□ 0.02
CNKSR1-202ENST00000374253 A0A1W2PS29 197 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 NME6O75414 186 aaPredicted RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 KRT75O95678 551 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 MT-ND2P03891 347 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 HOXB6P17509 224 aaKnown RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 UQCRC2P22695 453 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 CXCR2P25025 360 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 LAMA1P25391 3075 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 AK4P27144 223 aaPredicted RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 CD6P30203 668 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 BCL6P41182 706 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 IDH2P48735 452 aaKnown RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 RAB28P51157 221 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 ADPRHP54922 357 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 GABARAPL2P60520 117 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 TFF2Q03403 129 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 FADDQ13158 208 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 AQP6Q13520 282 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 NUDT18Q6ZVK8 323 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 IKBIPQ70UQ0 350 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 AHSA2Q719I0 299 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 NUDT13Q86X67 352 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 LGI4Q8N135 537 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 OR5D16Q8NGK9 328 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 SLC38A5Q8WUX1 472 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 LZICQ8WZA0 190 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 MTERF3Q96E29 417 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 FCRL4Q96PJ5 515 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 APOL4Q9BPW4 351 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 TUBA1CQ9BQE3 449 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 BTBD1Q9H0C5 482 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 SLC28A3Q9HAS3 691 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 SLC6A14Q9UN76 642 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 MDC1Q14676 2089 aaKnown RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF701M0R085 212 aaPredicted RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 ADAM23O75077 832 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 WBP4O75554 376 aaKnown RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 DNTTP04053 509 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 ARAFP10398 606 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 EMP3P54852 163 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 PRDX1Q06830 199 aaKnown RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 IL18R1Q13478 541 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 DCTN2Q13561 401 aaKnown RBP15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 ENPP2Q13822 863 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 KEAP1Q14145 624 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 HEPACAMQ14CZ8 416 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 SPCS2Q15005 226 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 ANKDD1AQ495B1 522 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 ENTHD1Q8IYW4 607 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 OR8K5Q8NH50 307 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 FBLIM1Q8WUP2 373 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 FAR1Q8WVX9 515 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 MUL1Q969V5 352 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms