RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 MSANTD1Q6ZTZ1 278 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 GTF2IRD2Q86UP8 949 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 GKN2Q86XP6 184 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 MSRB3Q8IXL7 192 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 NAGSQ8N159 534 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 ABHD11Q8NFV4 315 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 OR2L2Q8NH16 312 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 OR10A6Q8NH74 314 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 HPS1Q92902 700 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 PYCR2Q96C36 320 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 NRBF2Q96F24 287 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 ITCHQ96J02 903 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 FRG2BQ96QU4 278 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 NDEL1Q9GZM8 345 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 SMPD3Q9NY59 655 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-203ENST00000374116 SLC25A37Q9NYZ2 338 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 DLGAP4Q9Y2H0 992 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 CROCCQ5TZA2 2017 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 ELOVL7A1L3X0 281 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 KRT87PA6NCN2 255 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 CENPBD1B2RD01 187 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 EI24O14681 340 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 DNAJB5O75953 348 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 PRSS23O95084 383 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 GNAO1P09471 354 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 CLCNKAP51800 687 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 MLLT10P55197 1068 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 MAZP56270 477 aaKnown RBP13.62□□□□□ -0.23
HMGA1-203ENST00000374116 CSTF3Q12996 717 aaKnown RBP13.62□□□□□ -0.23
HMGA1-203ENST00000374116 CHIT1Q13231 466 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 CLCA4Q14CN2 919 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 SYTL3Q4VX76 610 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 ZNF761Q86XN6 746 aaPredicted RBP13.62□□□□□ -0.23
HMGA1-203ENST00000374116 NAXDQ8IW45 347 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 FBXO15Q8NCQ5 510 aaPredicted RBP13.62□□□□□ -0.23
HMGA1-203ENST00000374116 CLHC1Q8NHS4 586 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 ZDHHC1Q8WTX9 485 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 TMEM159Q96B96 161 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 TXNDC15Q96J42 360 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 ZNF514Q96K75 400 aaPredicted RBP13.62□□□□□ -0.23
HMGA1-203ENST00000374116 LINC00615Q96LM1 132 aaPredicted RBP13.62□□□□□ -0.23
HMGA1-203ENST00000374116 APOLD1Q96LR9 279 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 TIMM29Q9BSF4 260 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 ZNF883P0CG24 379 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 HOXB6P17509 224 aaKnown RBP13.62□□□□□ -0.23
HMGA1-203ENST00000374116 AMD1P17707 334 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 SDC1P18827 310 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 MATN1P21941 496 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 OPRL1P41146 370 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 OCA2Q04671 838 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 SUZ12Q15022 739 aaKnown RBP13.62□□□□□ -0.23
HMGA1-203ENST00000374116 CCDC157Q569K6 752 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 DBX2Q6ZNG2 339 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 SLC35F3Q8IY50 421 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 MICU2Q8IYU8 434 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 TMEM132CQ8N3T6 1108 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 DHRSXQ8N5I4 330 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 TMCO5AQ8N6Q1 288 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 DEFB124Q8NES8 71 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 OR4C6Q8NH72 309 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 LILRB4Q8NHJ6 448 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 FIG4Q92562 907 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 FCRL1Q96LA6 429 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 NRTNQ99748 197 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 KLHL25Q9H0H3 589 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 ATG10Q9H0Y0 220 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 NLGN3Q9NZ94 848 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 V9GYQ6 96 aa13.62□□□□□ -0.23
HMGA1-203ENST00000374116 ASXL3Q9C0F0 2248 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 PRR19A6NJB7 356 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 FAM220BPB1ANY3 271 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 H0YAE9 185 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 YKT6O15498 198 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 NOBOXO60393 691 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 PRMT3O60678 531 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 CATP04040 527 aaKnown RBP13.61□□□□□ -0.23
HMGA1-203ENST00000374116 PHC1P78364 1004 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 IRF8Q02556 426 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 ABRQ12979 859 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 E2F2Q14209 437 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 C6orf132Q5T0Z8 1188 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 METRNLQ641Q3 311 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 PLEKHG7Q6ZR37 379 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 THOC6Q86W42 341 aaKnown RBP13.61□□□□□ -0.23
HMGA1-203ENST00000374116 OR56A3Q8NH54 315 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
HMGA1-203ENST00000374116 APIPQ96GX9 242 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 CPPED1Q9BRF8 314 aaPredicted RBP13.61□□□□□ -0.23
HMGA1-203ENST00000374116 IKZF5Q9H5V7 419 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 KAT8Q9H7Z6 458 aaKnown RBP13.61□□□□□ -0.23
HMGA1-203ENST00000374116 CPNE5Q9HCH3 593 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 SERHLQ9NQF3 203 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 ADGRE2Q9UHX3 823 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 PCOLCE2Q9UKZ9 415 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 PCDHB14Q9Y5E9 798 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 CSNK1G3Q9Y6M4 447 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 PCNX2A6NKB5 2137 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 RP1P56715 2156 aa13.61□□□□□ -0.23
HMGA1-203ENST00000374116 LY6G6EA0A0G2JKS1 128 aa13.6□□□□□ -0.23
HMGA1-203ENST00000374116 M0QX08 132 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms