RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 DCUN1D3Q8IWE4 304 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 GEMIN6Q8WXD5 167 aaKnown RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 SGCDQ92629 289 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 HHIPQ96QV1 700 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 DOHHQ9BU89 302 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 NPLQ9BXD5 320 aaPredicted RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 POLMQ9NP87 494 aaPredicted RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 DCAF13Q9NV06 445 aaKnown RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 GPR83Q9NYM4 423 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 ZNF225Q9UK10 706 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 SPIN1Q9Y657 262 aaPredicted RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 COLEC10Q9Y6Z7 277 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 ANK1P16157 1881 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 NRG2O14511 850 aaPredicted RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 KMOO15229 486 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 H1F0P07305 194 aaKnown RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 SRPRAP08240 638 aaKnown RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 CCDC159P0C7I6 412 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 SMIM18P0DKX4 95 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 CMPK1P30085 196 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 AKT2P31751 481 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 NFATC3Q12968 1075 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 SP140Q13342 867 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 DEFB110Q30KQ9 67 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 CRTC2Q53ET0 693 aaPredicted RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 GALNT7Q86SF2 657 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 CARM1Q86X55 608 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 OR52L1Q8NGH7 329 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 OR8K5Q8NH50 307 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 TADA1Q96BN2 335 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 DNAJA3Q96EY1 480 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 DTD2Q96FN9 168 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 DIRAS2Q96HU8 199 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 ZNF347Q96SE7 839 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 NTMT1Q9BV86 223 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 YTHDF1Q9BYJ9 559 aaKnown RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 ZNF576Q9H609 170 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 IL21RQ9HBE5 538 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 PRSS16Q9NQE7 514 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 DZANK1Q9NVP4 752 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 GIN1Q9NXP7 522 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 ZNF624Q9P2J8 865 aaPredicted RBP7.46□□□□□ -1.21
HERC4-202ENST00000373700 HSFX1Q9UBD0 423 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 IRAK3Q9Y616 596 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 SPTA1P02549 2419 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 TRPM6Q9BX84 2022 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 CTSLP07711 333 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 SLC35G6P0C7Q6 338 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 PRG2P13727 222 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 TPTEP56180 551 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 OLR1P78380 273 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 ACVR1Q04771 509 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.46□□□□□ -1.22
HERC4-202ENST00000373700 SLC35F1Q5T1Q4 408 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 REEP3Q6NUK4 255 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 WDR53Q7Z5U6 358 aaPredicted RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 NLGN4XQ8N0W4 816 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 CACTIN-AS1Q8N1I8 211 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 CBARPQ8N350 705 aaPredicted RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 SLC15A4Q8N697 577 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 UXS1Q8NBZ7 420 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 HMGCLL1Q8TB92 370 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 GPR151Q8TDV0 419 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 BARD1Q99728 777 aaKnown RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 DPH7Q9BTV6 452 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 TTTY10Q9BZA0 68 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 CRISPLD2Q9H0B8 497 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 KRCC1Q9NPI7 259 aaPredicted RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 COMMD3Q9UBI1 195 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 A8MUA0 341 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 ARNTLO00327 626 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 SCAMP2O15127 329 aaKnown RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 FRS3O43559 492 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 TSPAN12O95859 305 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 RPLP0P05388 317 aaKnown RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 LCTP09848 1927 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 MPC1LP0DKB6 136 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 PIM1P11309 404 aaPredicted RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 ZNF10P21506 573 aaPredicted RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 C21orf33P30042 268 aaPredicted RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 CA5AP35218 305 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 PIGAP37287 484 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 PGDP52209 483 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 CRISP3P54108 245 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 RPS21P63220 83 aaKnown RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 YBX1P67809 324 aaKnown RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 PRR5P85299 388 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 VLDLRP98155 873 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 CDK5R2Q13319 367 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 ZNF829Q3KNS6 432 aaPredicted RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 WDR81Q562E7 1941 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 Q6ZNB5 142 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 OLIG3Q7RTU3 272 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 ZNF438Q7Z4V0 828 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 ZNF548Q8NEK5 533 aaPredicted RBP7.46□□□□□ -1.22
HERC4-202ENST00000373700 LRRC3BQ96PB8 259 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 SLC38A3Q99624 504 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 NRTNQ99748 197 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 CLMPQ9H6B4 373 aa7.46□□□□□ -1.22
HERC4-202ENST00000373700 GDE1Q9NZC3 331 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms