RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 FAM214AQ32MH5 1076 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 C6orf141Q5SZD1 244 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 CEP68Q76N32 757 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 ZNF540Q8NDQ6 660 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 APOL4Q9BPW4 351 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 MACROD1Q9BQ69 325 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 SLC6A17Q9H1V8 727 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 ZNF556Q9HAH1 456 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 CORO2BQ9UQ03 480 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 TRPM6Q9BX84 2022 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 GBF1Q92538 1859 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 ACPPP15309 386 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 SSR2P43308 183 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 GANABQ14697 944 aaKnown RBP16.31■□□□□ 0.2
VEGFA-205ENST00000372067 RGNQ15493 299 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 CST6Q15828 149 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 CCDC28AQ8IWP9 274 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 SETD9Q8NE22 299 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 OR2L2Q8NH16 312 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 OTUB1Q96FW1 271 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-205ENST00000372067 SLC28A3Q9HAS3 691 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 BRF2Q9HAW0 419 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 VNN3Q9NY84 501 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 TNFRSF11BO00300 401 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 UPK1AO00322 258 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 VEGFDO43915 354 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 DNAJA1P31689 397 aaKnown RBP16.31■□□□□ 0.2
VEGFA-205ENST00000372067 PTGER1P34995 402 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 WSCD2Q2TBF2 565 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 RFX4Q33E94 735 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 ZNF385BQ569K4 471 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 COX20Q5RI15 118 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 ZNF547Q8IVP9 402 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 KCNC2Q96PR1 638 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 CITED4Q96RK1 184 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 AMBRA1Q9C0C7 1298 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 MAPRE3Q9UPY8 281 aa16.31■□□□□ 0.2
VEGFA-205ENST00000372067 GLOD5A6NK44 160 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 CASP3P42574 277 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 CDK3Q00526 305 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 RAPSNQ13702 412 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 PNCKQ6P2M8 343 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 SERPINA11Q86U17 422 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 RAB8BQ92930 207 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 NODALQ96S42 347 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 ZDHHC5Q9C0B5 715 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 TM9SF3Q9HD45 589 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 RHCGQ9UBD6 479 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 ENPP5Q9UJA9 477 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 SCO1O75880 301 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 ALPPL2P10696 532 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 PTX3P26022 381 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-205ENST00000372067 HLCSP50747 726 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 WNT3P56703 355 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 ATAT1Q5SQI0 421 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 ZNF773Q6PK81 442 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 RTL10Q7L3V2 364 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 ZNF551Q7Z340 670 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-205ENST00000372067 ETFBKMTQ8IXQ9 262 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 PGBD3Q8N328 593 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 FBXL6Q8N531 539 aa16.3■□□□□ 0.2
VEGFA-205ENST00000372067 MBNL1Q9NR56 388 aaKnown RBP16.3■□□□□ 0.2
VEGFA-205ENST00000372067 CXorf51AA0A1B0GTR3 108 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 ISM1B1AKI9 464 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 DYRK3O43781 588 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 NADKO95544 446 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-205ENST00000372067 DNTTP04053 509 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 SPNP16150 400 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 ALDH4A1P30038 563 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 Q5BKY6 102 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 KIAA1324Q6UXG2 1013 aaKnown RBP16.29■□□□□ 0.2
VEGFA-205ENST00000372067 PIK3C3Q8NEB9 887 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 OR8J2Q8NGG1 315 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 VANGL1Q8TAA9 524 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-205ENST00000372067 CHTF18Q8WVB6 975 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 ROGDIQ9GZN7 287 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 MAGIXQ9H6Y5 334 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 GIMAP4Q9NUV9 329 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 IMPAD1Q9NX62 359 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 FBXO10Q9UK96 956 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 OR52A4PA6NMU1 304 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 FADS2O95864 444 aaKnown RBP16.29■□□□□ 0.2
VEGFA-205ENST00000372067 FPR1P21462 350 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 GRK3P35626 688 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 ZNF846Q147U1 533 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 TUBA3EQ6PEY2 450 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 IDO2Q6ZQW0 420 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 EIF3MQ7L2H7 374 aaKnown RBP16.29■□□□□ 0.2
VEGFA-205ENST00000372067 KIAA0907Q7Z7F0 614 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-205ENST00000372067 HMGN2P46Q86SG4 172 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 MINDY2Q8NBR6 621 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-205ENST00000372067 RORBQ92753 470 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 NKX2-4Q9H2Z4 354 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 COQ3Q9NZJ6 369 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 KLHL20Q9Y2M5 609 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 PCYT1BQ9Y5K3 369 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-205ENST00000372067 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
VEGFA-205ENST00000372067 TRBV5-3A0A0A0MS03 114 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms