RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CCM2LQ9NUG4 571 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 LUZP4Q9P127 313 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 UBE2J1Q9Y385 318 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 ADAM18Q9Y3Q7 739 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 MITFO75030 526 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 KCNJ8Q15842 424 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 CELF3Q5SZQ8 465 aaKnown RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 SERPINA9Q86WD7 417 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 ACO2Q99798 780 aaKnown RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 URM1Q9BTM9 101 aaKnown RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 ADAM19Q9H013 955 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 RAB3AP20336 220 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 COX15Q7KZN9 410 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 XYLT1Q86Y38 959 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 KIAA1522Q9P206 1035 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 TMX2Q9Y320 296 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 DISP2A7MBM2 1401 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 A0A1W2PQ67 120 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 AGAP14A8MT82 685 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 PI15O43692 258 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 ATG12O94817 140 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CASRP41180 1078 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 FAM111BQ6SJ93 734 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 HRH4Q9H3N8 390 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CCL15-CCL14A0A0B4J2E2 113 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 TOR1AO14656 332 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 ONECUT3O60422 494 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CA5AP35218 305 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 JAM2P57087 298 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CCL15Q16663 113 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 SGTBQ96EQ0 304 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 BRF2Q9HAW0 419 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 SERINC1Q9NRX5 453 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 FAM120CQ9NX05 1096 aaKnown RBP14.72□□□□□ -0.05
COL5A1-201ENST00000371817 RNF215Q9Y6U7 377 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CARNS1A5YM72 827 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CLDN11O75508 207 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 SCGB2A1O75556 95 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 SYT14Q8NB59 555 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 TRIB2Q92519 343 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 EPHA6Q9UF33 1036 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CACNG2Q9Y698 323 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 SLIT1O75093 1534 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 A0A1W2PPK0 400 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 NPC1O15118 1278 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CDK4P11802 303 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 JUPP14923 745 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 DGKEP52429 567 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 VSX2P58304 361 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CDCA2Q69YH5 1023 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-201ENST00000371817 REEP3Q6NUK4 255 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 ARHGAP11AQ6P4F7 1023 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 OR13C3Q8NGS6 347 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CYP2S1Q96SQ9 504 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 BLOC1S5-TXNDC5H3BN57 136 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 C1RP00736 705 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 AMY2AP04746 511 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 DNAJB1P25685 340 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 ASPAP45381 313 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 TAF1AQ15573 450 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-201ENST00000371817 FAM182BQ5T319 152 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 CHFRQ96EP1 664 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 BTF3L4Q96K17 158 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 NAP1L6A6NFF2 107 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 SOCS2O14508 198 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 RDH16O75452 317 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 RPS17P08708 135 aaKnown RBP14.72□□□□□ -0.05
COL5A1-201ENST00000371817 HADHBP55084 474 aaKnown RBP14.72□□□□□ -0.05
COL5A1-201ENST00000371817 TRAM2Q15035 370 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 TATDN3Q17R31 274 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 ZFPM1Q8IX07 1006 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 ZNF439Q8NDP4 499 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 NPLOC4Q8TAT6 608 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 PCDHGA6Q9Y5G7 932 aa14.72□□□□□ -0.05
COL5A1-201ENST00000371817 MRPL3P09001 348 aaKnown RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 ENDOUP21128 410 aaKnown RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 FAM69AQ5T7M9 428 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 AGAP6Q5VW22 663 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 DPY19L2P1Q6NXN4 242 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 MBOAT1Q6ZNC8 495 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 AGAP4Q96P64 663 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 SYT3Q9BQG1 590 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 ADAM12O43184 909 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 CDK14O94921 469 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 ADRA1BP35368 520 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 TPMTP51580 245 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 IRF5Q13568 498 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 MON1AQ86VX9 555 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 RGL4Q8IZJ4 473 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 CCDC74BQ96LY2 380 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 SLC19A3Q9BZV2 496 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 MAF1Q9H063 256 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 RNASE10Q5GAN6 216 aaKnown RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 FRG2Q64ET8 278 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 SPARTQ8N0X7 666 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 OR9I1Q8NGQ6 314 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 OR5H2Q8NGV7 314 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 NDNFQ8TB73 568 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 ADAMTS19Q8TE59 1207 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 FRG2BQ96QU4 278 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms