RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 GK3PQ14409 553 aa16.48■□□□□ 0.23
PTP4A1-201ENST00000370651 FAM76BQ5HYJ3 339 aa16.48■□□□□ 0.23
PTP4A1-201ENST00000370651 GDF6Q6KF10 455 aaPredicted RBP16.48■□□□□ 0.23
PTP4A1-201ENST00000370651 PMEPA1Q969W9 287 aa16.48■□□□□ 0.23
PTP4A1-201ENST00000370651 SLC25A36Q96CQ1 311 aa16.48■□□□□ 0.23
PTP4A1-201ENST00000370651 HCN3Q9P1Z3 774 aa16.48■□□□□ 0.23
PTP4A1-201ENST00000370651 INTS6Q9UL03 887 aaKnown RBP16.48■□□□□ 0.23
PTP4A1-201ENST00000370651 TOXO94900 526 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 OXSR1O95747 527 aaPredicted RBP16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 AGXTP21549 392 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 GPX3P22352 226 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 FSHRP23945 695 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 HOXD12P35452 270 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 ZNF486Q96H40 463 aaPredicted RBP16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 LRR1Q96L50 414 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 SCGB3A2Q96PL1 93 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 NLKQ9UBE8 527 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 VILLO15195 856 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 B4GAT1O43505 415 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 PRKYO43930 277 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 HTR1AP08908 422 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 GKP32189 559 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 FNTBP49356 437 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 INHBCP55103 352 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 ERVK-21P61565 698 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 Q6ZVL8 140 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 ABHD13Q7L211 337 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 FCAMRQ8WWV6 532 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 CENPMQ9NSP4 180 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 SMAD9O15198 467 aaKnown RBP16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 SLC16A5O15375 505 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 ATE1O95260 518 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 HK3P52790 923 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 E2F1Q01094 437 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 PRKCDQ05655 676 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 RING1Q06587 406 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 CCL14Q16627 93 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 CYP4V2Q6ZWL3 525 aaPredicted RBP16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 DCUN1D3Q8IWE4 304 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 DENND6BQ8NEG7 585 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 OR2AJ1Q8NGZ0 328 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 NETO1Q8TDF5 533 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 CYB5D2Q8WUJ1 264 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 HYLS1Q96M11 299 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 CLCC1Q96S66 551 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 NUAK1O60285 661 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 ZNF8P17098 575 aaPredicted RBP16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 TRAM1Q15629 374 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 ZNF789Q5FWF6 425 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 SLC5A8Q8N695 610 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 DPCDQ9BVM2 203 aaPredicted RBP16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 ZNF471Q9BX82 626 aaPredicted RBP16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 ACTR6Q9GZN1 396 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 SCP2D1Q9UJQ7 156 aa16.47■□□□□ 0.23
PTP4A1-201ENST00000370651 TLX3O43711 291 aaPredicted RBP16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 MRPS14O60783 128 aaKnown RBP16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 KAT7O95251 611 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 ACRV1P26436 265 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 ACTR1BP42025 376 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 ACTR1AP61163 376 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 RCAN2Q14206 197 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 PGM2L1Q6PCE3 622 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 OR2T33Q8NG76 320 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 ZFP90Q8TF47 636 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 GATAD2BQ8WXI9 593 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 RELTQ969Z4 430 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 CHMP1AQ9HD42 196 aaPredicted RBP16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 C13orf42A0A1B0GVH6 325 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 IL3P08700 152 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 NTRK2Q16620 822 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 GTDC1Q4AE62 458 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 HMBOX1Q6NT76 420 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 CEACAM19Q7Z692 300 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 ALDH16A1Q8IZ83 802 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 JPH3Q8WXH2 748 aaPredicted RBP16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 PTERQ96BW5 349 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 PPIL3Q9H2H8 161 aaKnown RBP16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 COPS7AQ9UBW8 275 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 LRRC37A3O60309 1634 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 IFNA21P01568 189 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 H2AFB2P0C5Z0 115 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 MPC1LP0DKB6 136 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 OR12D1P0DN82 309 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 HNF1BP35680 557 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 ATXN7L3Q14CW9 347 aaPredicted RBP16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 ZNF101Q8IZC7 436 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 OR5T3Q8NGG3 340 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 FANK1Q8TC84 345 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 METTL21AQ8WXB1 218 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 TTTY10Q9BZA0 68 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 PDLIM7Q9NR12 457 aa16.46■□□□□ 0.23
PTP4A1-201ENST00000370651 ANKRD12Q6UB98 2062 aa16.46■□□□□ 0.22
PTP4A1-201ENST00000370651 MRPL3P09001 348 aaKnown RBP16.46■□□□□ 0.22
PTP4A1-201ENST00000370651 LHCGRP22888 699 aa16.46■□□□□ 0.22
PTP4A1-201ENST00000370651 CXCR1P25024 350 aa16.46■□□□□ 0.22
PTP4A1-201ENST00000370651 NDUFS1P28331 727 aa16.46■□□□□ 0.22
PTP4A1-201ENST00000370651 NR4A2P43354 598 aa16.46■□□□□ 0.22
PTP4A1-201ENST00000370651 SNTB2Q13425 540 aaKnown RBP16.46■□□□□ 0.22
PTP4A1-201ENST00000370651 ABCA11PQ4W5N1 156 aa16.46■□□□□ 0.22
PTP4A1-201ENST00000370651 DESI1Q6ICB0 168 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms