RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ZSWIM9Q86XI8 627 aa18.87■□□□□ 0.61
LMO4-202ENST00000370544 POLDIP3Q9BY77 421 aaKnown RBP18.87■□□□□ 0.61
LMO4-202ENST00000370544 NKX2-4Q9H2Z4 354 aa18.87■□□□□ 0.61
LMO4-202ENST00000370544 H0YAE9 185 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 SOX1O00570 391 aaPredicted RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 SCAMP2O15127 329 aaKnown RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 TIMP1P01033 207 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 ELK4P28324 431 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 PDHA2P29803 388 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 NTSR1P30989 418 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 RPS3AP61247 264 aaKnown RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 ODF4Q2M2E3 257 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 CHST14Q8NCH0 376 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 TGM7Q96PF1 710 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 C2orf92A0A1B0GVN3 265 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 RASAL1O95294 804 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 ADRB3P13945 408 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 JUNDP17535 347 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 GDI2P50395 445 aaKnown RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 ADAM15Q13444 863 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 C18orf21Q32NC0 220 aaPredicted RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 TUBA3EQ6PEY2 450 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 MINDY1Q8N5J2 469 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 MR1Q95460 341 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 TSACCQ96A04 125 aaPredicted RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 SCRN2Q96FV2 425 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 PLOD2O00469 737 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 MAN2B1O00754 1011 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 GJA5P36382 358 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 GRIK2Q13002 908 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 KIAA0319Q5VV43 1072 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 OR4C11Q6IEV9 310 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 RANBP10Q6VN20 620 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 SLC15A3Q8IY34 581 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 TCEAL8Q8IYN2 117 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 HDAC2Q92769 488 aaKnown RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 FUBP1Q96AE4 644 aaKnown RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 ZBED3Q96IU2 234 aaPredicted RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 SLC45A3Q96JT2 553 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 EHD1Q9H4M9 534 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 IGSF5Q9NSI5 407 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 PCTPQ9UKL6 214 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 DNAJC15Q9Y5T4 150 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 RGPD1P0DJD0 1748 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 MAPK3P27361 379 aaPredicted RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 UNC5DQ6UXZ4 953 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 HACD2Q6Y1H2 254 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 CSNK1A1LQ8N752 337 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 GATSQ8NAP1 163 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 ERMAPQ96PL5 475 aaPredicted RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 PDE7BQ9NP56 450 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 APOBEC3BQ9UH17 382 aaKnown RBP18.86■□□□□ 0.61
LMO4-202ENST00000370544 LIPT1Q9Y234 373 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 ACTL7AQ9Y615 435 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 MYH6P13533 1939 aa18.86■□□□□ 0.61
LMO4-202ENST00000370544 TPD52L2O43399 206 aaKnown RBP18.85■□□□□ 0.61
LMO4-202ENST00000370544 PROM1O43490 865 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 F8A1P23610 371 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 FAM86B1Q8N7N1 296 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 C12orf43Q96C57 262 aaKnown RBP18.85■□□□□ 0.61
LMO4-202ENST00000370544 RBP7Q96R05 134 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 LDAHQ9H6V9 325 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 EIF3KQ9UBQ5 218 aaKnown RBP18.85■□□□□ 0.61
LMO4-202ENST00000370544 C5orf51A6NDU8 294 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 TEX46H3BTG2 121 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 NPC1O15118 1278 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 SNAP29O95721 258 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 HPRP00739 348 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 CSTBP04080 98 aaKnown RBP18.85■□□□□ 0.61
LMO4-202ENST00000370544 FBLP22087 321 aaKnown RBP18.85■□□□□ 0.61
LMO4-202ENST00000370544 TMEM35AQ53FP2 167 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 MANEALQ5VSG8 457 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 GID4Q8IVV7 300 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 MUS81Q96NY9 551 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 MYH1P12882 1939 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 JMJD7P0C870 316 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 DRD2P14416 443 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 ISCA2Q86U28 154 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 TMEM125Q96AQ2 219 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 PCDHGB2Q9Y5G2 931 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 MYOCOSA0A1B0GUC4 107 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 H3BSH0 61 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 SNNO75324 88 aaPredicted RBP18.85■□□□□ 0.61
LMO4-202ENST00000370544 DUSP3P51452 185 aaPredicted RBP18.85■□□□□ 0.61
LMO4-202ENST00000370544 CLDN8P56748 225 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 SH3BP2P78314 561 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 KCNAB2Q13303 367 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 STX12Q86Y82 276 aa18.85■□□□□ 0.61
LMO4-202ENST00000370544 DUX1O43812 170 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 CSTAP01040 98 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 OXTRP30559 389 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 DPH2Q9BQC3 489 aaPredicted RBP18.84■□□□□ 0.61
LMO4-202ENST00000370544 C8orf33Q9H7E9 229 aaPredicted RBP18.84■□□□□ 0.61
LMO4-202ENST00000370544 OR1A2Q9Y585 309 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 FESP07332 822 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 PEPDP12955 493 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 GADD45AP24522 165 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 KDELR2P33947 212 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 VEGFBP49765 207 aa18.84■□□□□ 0.61
LMO4-202ENST00000370544 NFE2L1Q14494 772 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms