RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ARMC12Q5T9G4 340 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 OTOP2Q7RTS6 562 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 TMEM173Q86WV6 379 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 SLC34A3Q8N130 599 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 SIX5Q8N196 739 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 AQP11Q8NBQ7 271 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 GOT1L1Q8NHS2 421 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 CXorf40BQ96DE9 158 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 COQ7Q99807 217 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 SOSTQ9BQB4 213 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 POLR2J2Q9GZM3 115 aaKnown RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ANKRA2Q9H9E1 313 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 TXNL4BQ9NX01 149 aaKnown RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 CRLS1Q9UJA2 301 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 NUP50Q9UKX7 468 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ALG5Q9Y673 324 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ENPP4Q9Y6X5 453 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 GABRR3A8MPY1 467 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 TLR4O00206 839 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 SLC43A1O75387 559 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ADAP00813 363 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 GALTP07902 379 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 HBQ1P09105 142 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 C1SP09871 688 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 FAM157BP0CG42 384 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 NAT1P18440 290 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 PRKACBP22694 351 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 MVDP53602 400 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ARPP19P56211 112 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 CLDN20P56880 219 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 DEFB103AP81534 67 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 HOXC5Q00444 222 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 MAB21L1Q13394 359 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 BTBD16Q32M84 506 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 PTCHD3Q3KNS1 767 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ZNF770Q6IQ21 691 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ZNF782Q6ZMW2 699 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 CBARPQ8N350 705 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 NLGN4YQ8NFZ3 816 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 PIH1D2Q8WWB5 315 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 GTPBP3Q969Y2 492 aaKnown RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 VWCEQ96DN2 955 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 UCK2Q9BZX2 261 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ABCG8Q9H221 673 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 CCSER2Q9H7U1 834 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 ZFYVE1Q9HBF4 777 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 MARCH5Q9NX47 278 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 MRPL39Q9NYK5 338 aaKnown RBP16.65■□□□□ 0.26
CHTOP-203ENST00000368690 PRKAG2Q9UGJ0 569 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 SPEF1Q9Y4P9 236 aa16.65■□□□□ 0.26
CHTOP-203ENST00000368690 A0A1B0GVM2 712 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 LEUTXA8MZ59 168 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 SLC16A5O15375 505 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 PRAMEF4O60810 478 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 CSF2P04141 144 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 HIST1H2AGP0C0S8 130 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-203ENST00000368690 MSL3P1P0C860 447 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 CPEP16870 476 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 POLR2CP19387 275 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-203ENST00000368690 TNFRSF1BP20333 461 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 HIST1H2ADP20671 130 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 PTPN5P54829 565 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 ACSM2AQ08AH3 577 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 HNRNPA0Q13151 305 aaKnown RBP16.64■□□□□ 0.25
CHTOP-203ENST00000368690 SP140Q13342 867 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 ILKQ13418 452 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 SCARB2Q14108 478 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 ANGPT1Q15389 498 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 CTXN3Q4LDR2 81 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 PRAMEF9Q5VWM5 478 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 ACSM2BQ68CK6 577 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 LAMTOR1Q6IAA8 161 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 FUT10Q6P4F1 479 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 ZNF783Q6ZMS7 281 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 UBE2R2Q712K3 238 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-203ENST00000368690 NXPE1Q8N323 547 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 CAMKK1Q8N5S9 505 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 FBXO22Q8NEZ5 403 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 MAP6Q96JE9 813 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 HIST1H2AHQ96KK5 128 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 HYLS1Q96M11 299 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 HIST1H2AJQ99878 128 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 TCF25Q9BQ70 676 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 H2AFJQ9BTM1 129 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 CWH43Q9H720 699 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 CLEC2DQ9UHP7 191 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 KCND3Q9UK17 655 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 GLYATL1P3A0A0U1RQE8 302 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 ABHD14A-ACY1A0A1B0GW23 586 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 AGAP14A8MT82 685 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 STK25O00506 426 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 PRKAR1AP10644 381 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 CYP2A6P11509 494 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-203ENST00000368690 CKMT1AP12532 417 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 HLA-FP30511 346 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 NSG1P42857 185 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 OR1E2P47887 323 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 PPP3R1P63098 170 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 EEF1A2Q05639 463 aaKnown RBP16.64■□□□□ 0.25
CHTOP-203ENST00000368690 RIN1Q13671 783 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms