RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SLX1AQ9BQ83 275 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 CDCP1Q9H5V8 836 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 PNO1Q9NRX1 252 aaKnown RBP17.7■□□□□ 0.42
CKS1B-203ENST00000368439 PSMC3IPQ9P2W1 217 aaPredicted RBP17.7■□□□□ 0.42
CKS1B-203ENST00000368439 PPT2Q9UMR5 302 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 IQANK1A0A1B0GTG1 560 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 FOXE1O00358 373 aaPredicted RBP17.69■□□□□ 0.42
CKS1B-203ENST00000368439 PPP6CO00743 305 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 SEMA7AO75326 666 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 MYO1DO94832 1006 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 SHBGP04278 402 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 PTX3P26022 381 aaPredicted RBP17.69■□□□□ 0.42
CKS1B-203ENST00000368439 BSGP35613 385 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 CCNG1P51959 295 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 MLF1P58340 268 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 TAS2R50P59544 299 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 SLAMF1Q13291 335 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 CUL3Q13618 768 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 RCN2Q14257 317 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 GGTA1PQ4G0N0 100 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 ZNF468Q5VIY5 522 aaPredicted RBP17.69■□□□□ 0.42
CKS1B-203ENST00000368439 LCA5Q86VQ0 697 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 ZCCHC7Q8N3Z6 543 aaKnown RBP17.69■□□□□ 0.42
CKS1B-203ENST00000368439 ST6GALNAC3Q8NDV1 305 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 ANKRD9Q96BM1 317 aaPredicted RBP17.69■□□□□ 0.42
CKS1B-203ENST00000368439 ANKZF1Q9H8Y5 726 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 ADAP2Q9NPF8 381 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 SEMA4BQ9NPR2 832 aaPredicted RBP17.69■□□□□ 0.42
CKS1B-203ENST00000368439 VTI1BQ9UEU0 232 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 PCDHGB6Q9Y5F9 930 aa17.69■□□□□ 0.42
CKS1B-203ENST00000368439 USP9YO00507 2555 aaPredicted RBP17.69■□□□□ 0.42
CKS1B-203ENST00000368439 MYOCOSA0A1B0GUC4 107 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 ANKUB1A6NFN9 424 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 GABRR3A8MPY1 467 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 LDB3O75112 727 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 EEDO75530 441 aaKnown RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 TPP2P29144 1249 aaPredicted RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 TDGF1P3P51864 188 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 HNRNPH2P55795 449 aaKnown RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 IGLV3-21P80748 117 aaPredicted RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 ELAVL1Q15717 326 aaKnown RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 FHL5Q5TD97 284 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 FAM219BQ5XKK7 198 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 MRM1Q6IN84 353 aaKnown RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 SH2D5Q6ZV89 423 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 ZNF227Q86WZ6 799 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 BCORP1Q8N888 145 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 OR4F6Q8NGB9 312 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 ACMSDQ8TDX5 336 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 PTPMT1Q8WUK0 201 aaPredicted RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 ATP6V1E2Q96A05 226 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 SCMH1Q96GD3 660 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 UTP23Q9BRU9 249 aaKnown RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 ALOXE3Q9BYJ1 711 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 DDX31Q9H8H2 851 aaKnown RBP17.68■□□□□ 0.42
CKS1B-203ENST00000368439 ANKRD10Q9NXR5 420 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 ZNF225Q9UK10 706 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 FBXW2Q9UKT8 454 aa17.68■□□□□ 0.42
CKS1B-203ENST00000368439 A0A0A6YYD5 115 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 A0A1W2PPM1 405 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 BLACEA4D250 179 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 SYNDIG1LA6NDD5 238 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 FOXO6A8MYZ6 492 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 GOLGA8RI6L899 631 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 CDK2AP1O14519 115 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 DLX3O60479 287 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 NEURL1O76050 574 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 PYGBP11216 843 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 EDN3P14138 238 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 CPN2P22792 545 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 CLCN2P51788 898 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 RAP1GDS1P52306 607 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 CDH13P55290 713 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 PHEXP78562 749 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 OR1C1Q15619 314 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 UNC50Q53HI1 259 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 ZNF766Q5HY98 468 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 FRG2Q64ET8 278 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 SPINK14Q6IE38 97 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 FAM180AQ6UWF9 173 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 PRR7Q8TB68 274 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 NCLNQ969V3 563 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 MTFMTQ96DP5 389 aaKnown RBP17.67■□□□□ 0.42
CKS1B-203ENST00000368439 VMP1Q96GC9 406 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 FRG2BQ96QU4 278 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 HES7Q9BYE0 225 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 TRIM45Q9H8W5 580 aaPredicted RBP17.67■□□□□ 0.42
CKS1B-203ENST00000368439 ABI3Q9P2A4 366 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 TBK1Q9UHD2 729 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 ATG4BQ9Y4P1 393 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 ASB4Q9Y574 426 aa17.67■□□□□ 0.42
CKS1B-203ENST00000368439 TRBV11-1A0A0K0K1C0 115 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 TMEM200CA6NKL6 621 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 TMPRSS11DO60235 418 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 FGF17O60258 216 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 PRKNO60260 465 aaPredicted RBP17.66■□□□□ 0.42
CKS1B-203ENST00000368439 RNF224P0DH78 156 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 TSPAN8P19075 237 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 TRHRP34981 398 aaPredicted RBP17.66■□□□□ 0.42
CKS1B-203ENST00000368439 HSD17B3P37058 310 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms