RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TP63Q9H3D4 680 aaPredicted RBP14.87□□□□□ -0.03
CKS1B-202ENST00000368436 COPS7BQ9H9Q2 264 aaPredicted RBP14.87□□□□□ -0.03
CKS1B-202ENST00000368436 MCCC2Q9HCC0 563 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 LYRM4Q9HD34 91 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 HPF1Q9NWY4 346 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 POLQO75417 2590 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 WWP2O00308 870 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 PHGDHO43175 533 aaKnown RBP14.86□□□□□ -0.03
CKS1B-202ENST00000368436 PDE9AO76083 593 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 STMN1P16949 149 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 IGFBP2P18065 325 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 SOX3P41225 446 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 CASP2P42575 452 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 PAFAH1B1P43034 410 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 KCNC1P48547 511 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 HK2P52789 917 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 GNG11P61952 73 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 STX4Q12846 297 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 ZKSCAN8Q15776 578 aaPredicted RBP14.86□□□□□ -0.03
CKS1B-202ENST00000368436 PDK4Q16654 411 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 PAGE2BQ5JRK9 111 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 PAOXQ6QHF9 649 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 IL20RBQ6UXL0 311 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 CAPN12Q6ZSI9 719 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 CEP128Q6ZU80 1094 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 ZNF321PQ8N8H1 164 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 SNX31Q8N9S9 440 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 OR14A16Q8NHC5 309 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 LILRB4Q8NHJ6 448 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 CDKL2Q92772 493 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 KCNC2Q96PR1 638 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 KRT12Q99456 494 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 NAPGQ99747 312 aaPredicted RBP14.86□□□□□ -0.03
CKS1B-202ENST00000368436 CPNE1Q99829 537 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 ROGDIQ9GZN7 287 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 ZDHHC11Q9H8X9 412 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 RNF14Q9UBS8 474 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 RNF6Q9Y252 685 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 F8P00451 2351 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 DNAJC13O75165 2243 aa14.86□□□□□ -0.03
CKS1B-202ENST00000368436 MYOCOSA0A1B0GUC4 107 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 FAM159BA6NKW6 160 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 EIF3HO15372 352 aaKnown RBP eCLIP14.85□□□□□ -0.03
CKS1B-202ENST00000368436 GLSO94925 669 aaPredicted RBP14.85□□□□□ -0.03
CKS1B-202ENST00000368436 SCELO95171 688 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 C1QAP02745 245 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 CNR1P21554 472 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 ATP5A1P25705 553 aaKnown RBP14.85□□□□□ -0.03
CKS1B-202ENST00000368436 CHRNB4P30926 498 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 PPIAP62937 165 aaKnown RBP14.85□□□□□ -0.03
CKS1B-202ENST00000368436 RNF4P78317 190 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 TLE4Q04727 773 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 CHIT1Q13231 466 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 SERTAD2Q14140 314 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 TESK1Q15569 626 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 HIST2H2ACQ16777 129 aaPredicted RBP14.85□□□□□ -0.03
CKS1B-202ENST00000368436 HIST2H2AA3Q6FI13 130 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 ZNF793Q6ZN11 406 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 RTL4Q6ZR62 310 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 ACOT4Q8N9L9 421 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 SRFBP1Q8NEF9 429 aaKnown RBP14.85□□□□□ -0.03
CKS1B-202ENST00000368436 ZNF473Q8WTR7 871 aaKnown RBP14.85□□□□□ -0.03
CKS1B-202ENST00000368436 CHTF18Q8WVB6 975 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 RND1Q92730 232 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 TBCDQ9BTW9 1192 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 MS4A8Q9BY19 250 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 CD244Q9BZW8 370 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 CD274Q9NZQ7 290 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 WHRNQ9P202 907 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 TXNDC16Q9P2K2 825 aa14.85□□□□□ -0.03
CKS1B-202ENST00000368436 A0A0G2JMM0 328 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 A0A1W2PPB8 328 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 A0A1W2PRS3 328 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 TCRBV9S1A1TA0A576 114 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 KIR3DP1A8MWS1 328 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 ACOT7O00154 380 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 ZNF354AO60765 605 aaPredicted RBP14.84□□□□□ -0.03
CKS1B-202ENST00000368436 LDB3O75112 727 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 TOXO94900 526 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 TNNI3P19429 210 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 GP5P40197 560 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 RAB10P61026 200 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 PLGLB1Q02325 96 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 IRF8Q02556 426 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 TFF3Q07654 80 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 PCDH1Q08174 1060 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 ZNF750Q32MQ0 723 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 TMEM35AQ53FP2 167 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 NDUFAF5Q5TEU4 345 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 LRRC70Q7Z2Q7 622 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 SLC22A16Q86VW1 577 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 LAS2Q8IYD9 372 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 RPRMLQ8N4K4 120 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 GOLM1Q8NBJ4 401 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 C7orf57Q8NEG2 295 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 OR5L2Q8NGL0 311 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 SLC2A12Q8TD20 617 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 ANKRD9Q96BM1 317 aaPredicted RBP14.84□□□□□ -0.03
CKS1B-202ENST00000368436 SCYL1Q96KG9 808 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 SGCZQ96LD1 299 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms