RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 C8GP07360 202 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 GNSP15586 552 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 SDC1P18827 310 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 CORO1AP31146 461 aaKnown RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 SLC6A4P31645 630 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 PCGF2P35227 344 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 SOX6P35712 828 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 PIK3CBP42338 1070 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 HNMTP50135 292 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 TPMTP51580 245 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 UGT2B15P54855 530 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 RPP38P78345 283 aaKnown RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 HMGCS1Q01581 520 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 STARD3Q14849 445 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 TRIP6Q15654 476 aaKnown RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 TIGD6Q17RP2 521 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 C18orf21Q32NC0 220 aaPredicted RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 WDR45BQ5MNZ6 344 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 ZNF362Q5T0B9 420 aaPredicted RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 AGAP6Q5VW22 663 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 STEAP3Q658P3 488 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 TMEM215Q68D42 235 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 THOC7Q6I9Y2 204 aaKnown RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 DOK6Q6PKX4 331 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 AHSA2Q719I0 299 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 GALNT5Q7Z7M9 940 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 GLRX5Q86SX6 157 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 CCDC190Q86UF4 302 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 C1orf52Q8N6N3 182 aaKnown RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 DCBLD1Q8N8Z6 715 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 ATG16L2Q8NAA4 619 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 SELENOMQ8WWX9 145 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 ADAMTS14Q8WXS8 1223 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 PYCR2Q96C36 320 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 TMCO6Q96DC7 493 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 MYEOVQ96EZ4 313 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 TOE1Q96GM8 510 aaKnown RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 HSH2DQ96JZ2 352 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 AGAP4Q96P64 663 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 INPP5KQ9BT40 448 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 YIPF2Q9BWQ6 316 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 CDADC1Q9BWV3 514 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 GPR63Q9BZJ6 419 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 ZDHHC5Q9C0B5 715 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 ABCB10Q9NRK6 738 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 SACM1LQ9NTJ5 587 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 EXD2Q9NVH0 621 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 ADPRHL2Q9NX46 363 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 SPASTQ9UBP0 616 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 BTNL2Q9UIR0 455 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 PPT2Q9UMR5 302 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 PCDHGA6Q9Y5G7 932 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 METTL12A8MUP2 240 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 MAGEB17A8MXT2 336 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 FPGTO14772 594 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 FFAR3O14843 346 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 DSCR3O14972 297 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 GPR42O15529 346 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 TBX1O43435 398 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 SCN2BO60939 215 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 SOCS5O75159 536 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 PGLSO95336 258 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 ZNF682O95780 498 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 DLGAP3O95886 979 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 PDYNP01213 254 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 PIPP12273 146 aaPredicted RBP11.02□□□□□ -0.65
USF1-201ENST00000368019 MYCLP1P12525 358 aaPredicted RBP11.02□□□□□ -0.65
USF1-201ENST00000368019 AMD1P17707 334 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 GABRB1P18505 474 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 ACRV1P26436 265 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 ALDH4A1P30038 563 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 LIPAP38571 399 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 SLC6A12P48065 614 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 COPZ1P61923 177 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 LSM3P62310 102 aaKnown RBP11.02□□□□□ -0.65
USF1-201ENST00000368019 ARF5P84085 180 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 VLDLRP98155 873 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 BNC1Q01954 994 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 RBBP4Q09028 425 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 ZNF234Q14588 700 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 COLEC12Q5KU26 742 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 ARMC12Q5T9G4 340 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 DBX2Q6ZNG2 339 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 FAM92BQ6ZTR7 304 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 ZNF551Q7Z340 670 aaPredicted RBP11.02□□□□□ -0.65
USF1-201ENST00000368019 NLRP8Q86W28 1048 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 PTOV1Q86YD1 416 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 CCDC71Q8IV32 467 aaPredicted RBP11.02□□□□□ -0.65
USF1-201ENST00000368019 DENND1CQ8IV53 801 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 NAXDQ8IW45 347 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 KLHDC8AQ8IYD2 350 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 METTL4Q8N3J2 472 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 PARP16Q8N5Y8 322 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 CXorf40BQ96DE9 158 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 MYO19Q96H55 970 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 C7orf34Q96L11 122 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 HBEGFQ99075 208 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 SPON2Q9BUD6 331 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 GPR174Q9BXC1 333 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms