RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 GRM7Q14831 915 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 ABRAXAS2Q15018 415 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 P2RY8Q86VZ1 359 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 CRB3Q9BUF7 120 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 TBX21Q9UL17 535 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 NENFQ9UMX5 172 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 E7EQ34 232 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PPP3R1P63098 170 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 SPATS1Q496A3 300 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PYDC2Q56P42 97 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 ZNF100Q8IYN0 542 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 TRIM43Q96BQ3 446 aaPredicted RBP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 SLC22A12Q96S37 553 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 CD320Q9NPF0 282 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 LRIT1Q9P2V4 623 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 RPH3AQ9Y2J0 694 aaPredicted RBP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 UBE2QL1A1L167 161 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 H3BNX3 289 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 TBX10O75333 385 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 MERTKQ12866 999 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 RNF111Q6ZNA4 994 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 TREML1Q86YW5 311 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 CLEC1AQ8NC01 280 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 CCDC54Q8NEL0 328 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 NR4A3Q92570 626 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 AURKBQ96GD4 344 aaPredicted RBP11.1□□□□□ -0.63
SYNE1-204ENST00000367248 CLEC4MQ9H2X3 399 aaPredicted RBP11.1□□□□□ -0.63
SYNE1-204ENST00000367248 MARK1Q9P0L2 795 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 WBP11Q9Y2W2 641 aaKnown RBP11.1□□□□□ -0.63
SYNE1-204ENST00000367248 BCAS2O75934 225 aaPredicted RBP11.1□□□□□ -0.63
SYNE1-204ENST00000367248 SELENOVP59797 346 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 KCNC4Q03721 635 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 CYBRD1Q53TN4 286 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 TSSK4Q6SA08 328 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 MCHR1Q99705 422 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 TTTY10Q9BZA0 68 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.1□□□□□ -0.63
SYNE1-204ENST00000367248 POFUT2Q9Y2G5 429 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 PCDHGB7Q9Y5F8 929 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 NUMA1Q14980 2115 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 LOC285095A0A1B0GVY8 99 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 A0A1W2PPL8 197 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 FAM189A1O60320 539 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 DRD2P14416 443 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 FNTBP49356 437 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 SHC2P98077 582 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 NADSYN1Q6IA69 706 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 POC5Q8NA72 575 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 S100ZQ8WXG8 99 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 MAPKAP1Q9BPZ7 522 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 PCDHGA6Q9Y5G7 932 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 ENTPD2Q9Y5L3 495 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 TLR4O00206 839 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 TIMP2P16035 220 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 FOLR3P41439 243 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 SIM1P81133 766 aaPredicted RBP11.1□□□□□ -0.63
SYNE1-204ENST00000367248 FADDQ13158 208 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 SLC14A2Q15849 920 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 VMACQ2NL98 169 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 RABEPKQ7Z6M1 372 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 SLCO6A1Q86UG4 719 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 HUS1BQ8NHY5 278 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
SYNE1-204ENST00000367248 DTD2Q96FN9 168 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 TIAM2Q8IVF5 1701 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 A0A096LPI6 279 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 ZNF140P52738 457 aaPredicted RBP11.1□□□□□ -0.63
SYNE1-204ENST00000367248 PERM1Q5SV97 790 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 MANEALQ5VSG8 457 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 MFSD6LQ8IWD5 586 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 ACVR1CQ8NER5 493 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 ASB15Q8WXK1 588 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 MOCOSQ96EN8 888 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 MACROD1Q9BQ69 325 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 BRF2Q9HAW0 419 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 A0A1B0GVT2 93 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 EMC8O43402 210 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 BMP1P13497 986 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 TCTE1Q5JU00 501 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 IER5LQ5T953 404 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 NANOGP8Q6NSW7 305 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 ERMP1Q7Z2K6 904 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 CHFRQ96EP1 664 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 COX4I2Q96KJ9 171 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 UCK2Q9BZX2 261 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 NANOGQ9H9S0 305 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 CXorf21Q9HAI6 301 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
SYNE1-204ENST00000367248 EXOC3L2Q2M3D2 409 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 FLYWCH1Q4VC44 716 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 C3orf38Q5JPI3 329 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 KRT74Q7RTS7 529 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 KRTCAP2Q8N6L1 136 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 C7orf57Q8NEG2 295 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 OR8K5Q8NH50 307 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 OR14L1PQ8NHC6 308 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 PYURFQ96I23 114 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 IL4I1Q96RQ9 567 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 KATNBL1Q9H079 304 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms