RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 HOXC5Q00444 222 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TMEM220Q6QAJ8 160 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 DEF8Q6ZN54 512 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMC3-201ENST00000361804 ZFP41Q8N8Y5 198 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 KBTBD8Q8NFY9 601 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 OVCA2Q8WZ82 227 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SLC6A18Q96N87 628 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 OR2A14Q96R47 310 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 NXF2Q9GZY0 626 aaKnown RBP10.09□□□□□ -0.79
SMC3-201ENST00000361804 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 POFUT2Q9Y2G5 429 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 PCYT1BQ9Y5K3 369 aaPredicted RBP10.09□□□□□ -0.79
SMC3-201ENST00000361804 PDZK1P1A8MUH7 402 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TAF4O00268 1085 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 CCNB2O95067 398 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 ALPPL2P10696 532 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TNNI3P19429 210 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SLC15A1P46059 708 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TRIM60Q495X7 471 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 GRHL2Q6ISB3 625 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 CHCHD4Q8N4Q1 142 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 VPS37AQ8NEZ2 397 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 OR2A12Q8NGT7 310 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TP53INP1Q96A56 240 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SLC6A16Q9GZN6 736 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 CXorf36Q9H7Y0 433 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 RMI1Q9H9A7 625 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 CSO75390 466 aaKnown RBP10.09□□□□□ -0.79
SMC3-201ENST00000361804 CTSLP07711 333 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 HBQ1P09105 142 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SDHBP21912 280 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 XCR1P46094 333 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 ZNF79Q15937 498 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SLCO4C1Q6ZQN7 724 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 CCDC190Q86UF4 302 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 CFAP206Q8IYR0 622 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 ASB15Q8WXK1 588 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 PPCDCQ96CD2 204 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 COQ8BQ96D53 544 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 FYTTD1Q96QD9 318 aaKnown RBP10.09□□□□□ -0.79
SMC3-201ENST00000361804 LYSMD1Q96S90 227 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 NDEL1Q9GZM8 345 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 MRPL17Q9NRX2 175 aaKnown RBP10.09□□□□□ -0.79
SMC3-201ENST00000361804 FTSJ1Q9UET6 329 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 LEFTY2O00292 366 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 PPM1DO15297 605 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TEX28O15482 410 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 GSTM1P09488 218 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 HNRNPFP52597 415 aaKnown RBP10.09□□□□□ -0.79
SMC3-201ENST00000361804 AP1S2P56377 157 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 PRKCDQ05655 676 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 HSPB3Q12988 150 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 FRMPD2BQ6IN97 320 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SLC39A5Q6ZMH5 540 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 NANOGNBQ7Z5D8 188 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TRIM48Q8IWZ4 208 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TCEANCQ8N8B7 351 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 OR6F1Q8NGZ6 308 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 FIBINQ8TAL6 211 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 C16orf78Q8WTQ4 265 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 FCGR1BQ92637 280 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 TCEAL4Q96EI5 215 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 PIP5K1AQ99755 562 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SLC30A2Q9BRI3 323 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SLC46A2Q9BY10 475 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 REEP4Q9H6H4 257 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 MVB12BQ9H7P6 319 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 SMURF1Q9HCE7 757 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 PLCXD1Q9NUJ7 323 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 BTNL2Q9UIR0 455 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 NUMA1Q14980 2115 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 FAM47E-STBD1D6RA91 191 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 GUCY1B2O75343 617 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 SEMA3DO95025 777 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 PTTG1O95997 202 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 FURINP09958 794 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 CBLP22681 906 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 EPHB3P54753 998 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 CAMK1Q14012 370 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 INSL4Q14641 139 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 FLYWCH1Q4VC44 716 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 PLEKHS1Q5SXH7 462 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 FAM9CQ8IZT9 166 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 CPA6Q8N4T0 437 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 HORMAD2Q8N7B1 307 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 DTX3Q8N9I9 347 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 GPR32P1Q8NGA4 272 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
SMC3-201ENST00000361804 ABCB9Q9NP78 766 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 A0A1W2PQ09 198 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 ISPDA4D126 451 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 H0YIV9 168 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 CCRL2O00421 344 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 NDUFB5O43674 189 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 OR10H3O60404 316 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 B4GALT2O60909 372 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 SLCO2B1O94956 709 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 CYP17A1P05093 508 aa10.08□□□□□ -0.8
SMC3-201ENST00000361804 MPC1LP0DKB6 136 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms