RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 PCBD2Q9H0N5 130 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 CCNB1IP1Q9NPC3 277 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 IMP3Q9NV31 184 aaKnown RBP21.55■■□□□ 1.04
LDB1-201ENST00000361198 AASSQ9UDR5 926 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 TICRRQ7Z2Z1 1910 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 BOLA2-SMG1P6H3BVE0 249 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 REEP5Q00765 189 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 DLX2Q07687 328 aaPredicted RBP21.55■■□□□ 1.04
LDB1-201ENST00000361198 KIAA1614Q5VZ46 1190 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 ZNF300Q96RE9 604 aaPredicted RBP21.55■■□□□ 1.04
LDB1-201ENST00000361198 WDR12Q9GZL7 423 aaKnown RBP21.55■■□□□ 1.04
LDB1-201ENST00000361198 XKR8Q9H6D3 395 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 FZD3Q9NPG1 666 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 C1GALT1Q9NS00 363 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 ADPRHL2Q9NX46 363 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 CLEC1BQ9P126 229 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 DNAH14Q0VDD8 3507 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 PLRG1O43660 514 aaKnown RBP21.54■■□□□ 1.04
LDB1-201ENST00000361198 EPHA2P29317 976 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 MAT2AP31153 395 aaKnown RBP21.54■■□□□ 1.04
LDB1-201ENST00000361198 BSGP35613 385 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 MAP2K4P45985 399 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 CLCA4Q14CN2 919 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 SLCO6A1Q86UG4 719 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 RNF130Q86XS8 419 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 TMCO5AQ8N6Q1 288 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 SIGLEC11Q96RL6 698 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 MOSPD1Q9UJG1 213 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 MAP4K5Q9Y4K4 846 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 AP1M2Q9Y6Q5 423 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.54■■□□□ 1.04
LDB1-201ENST00000361198 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.54■■□□□ 1.04
LDB1-201ENST00000361198 SEMA3DO95025 777 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 OPN1SWP03999 348 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 IGFALSP35858 605 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 PROX2Q3B8N5 592 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 PLD3Q8IV08 490 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 SVOPQ8N4V2 548 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 S100ZQ8WXG8 99 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 MYOCQ99972 504 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 DOHHQ9BU89 302 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 BTBD1Q9H0C5 482 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 ABCG4Q9H172 646 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 S1PR5Q9H228 398 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 REEP1Q9H902 201 aa21.54■■□□□ 1.04
LDB1-201ENST00000361198 MAN1A2O60476 641 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 NTSR1P30989 418 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 CHI3L1P36222 383 aaPredicted RBP21.53■■□□□ 1.04
LDB1-201ENST00000361198 MAPK12P53778 367 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 IL1RL1Q01638 556 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 GCNT6Q5T4J0 391 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 PRSS48Q7RTY5 328 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 BTLAQ7Z6A9 289 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 P2RY8Q86VZ1 359 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 CCDC71Q8IV32 467 aaPredicted RBP21.53■■□□□ 1.04
LDB1-201ENST00000361198 TM4SF18Q96CE8 201 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 CAMK1GQ96NX5 476 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 TIMM29Q9BSF4 260 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 MROQ9BYG7 248 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 ACOT13Q9NPJ3 140 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 KRT84Q9NSB2 600 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 THUMPD1Q9NXG2 353 aaKnown RBP21.53■■□□□ 1.04
LDB1-201ENST00000361198 SLC17A4Q9Y2C5 497 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 RGS10O43665 173 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 LCMT2O60294 686 aaKnown RBP21.53■■□□□ 1.04
LDB1-201ENST00000361198 RNGTTO60942 597 aaKnown RBP21.53■■□□□ 1.04
LDB1-201ENST00000361198 MT-ND2P03891 347 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 DNTTP04053 509 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 SOAT1P35610 550 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 SELENOWP63302 87 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 ZNF540Q8NDQ6 660 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 LHX9Q9NQ69 397 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 FBXO8Q9NRD0 319 aa21.53■■□□□ 1.04
LDB1-201ENST00000361198 IGKV1-8A0A0C4DH67 115 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 OR52A4PA6NMU1 304 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 M0R3G1 203 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 SCAMP1O15126 338 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 OR1F1O43749 312 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 DDCP20711 480 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 PRIM2P49643 509 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 ST13P50502 369 aaKnown RBP21.52■■□□□ 1.04
LDB1-201ENST00000361198 ADPRHP54922 357 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 CSNK1G2P78368 415 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 FADDQ13158 208 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 SCARB2Q14108 478 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 OXA1LQ15070 435 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 SMN1Q16637 294 aaKnown RBP21.52■■□□□ 1.04
LDB1-201ENST00000361198 KIAA1161Q6NSJ0 714 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 TSEN54Q7Z6J9 526 aaKnown RBP21.52■■□□□ 1.04
LDB1-201ENST00000361198 NFKBIDQ8NI38 313 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 NDNFQ8TB73 568 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 IPCEF1Q8WWN9 437 aaPredicted RBP21.52■■□□□ 1.04
LDB1-201ENST00000361198 FAM131CQ96AQ9 280 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 ICKQ9UPZ9 632 aa21.52■■□□□ 1.04
LDB1-201ENST00000361198 TBC1D3DA0A087WVF3 549 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3IA0A087WXS9 549 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3EA0A087X179 549 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3KA0A087X1G2 549 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3FA6NER0 549 aaPredicted RBP21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3LB9A6J9 549 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms