RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 B3GNT7Q8NFL0 401 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 FANK1Q8TC84 345 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 LYARQ9NX58 379 aaKnown RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 IGKV6D-21A0A0A0MT36 114 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 STK25O00506 426 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 SLC16A5O15375 505 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 CSN2P05814 226 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 HAPLN1P10915 354 aaPredicted RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 JUPP14923 745 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 GALNTL5Q7Z4T8 443 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 GPR149Q86SP6 731 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 SLC5A11Q8WWX8 675 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 SIAEQ9HAT2 523 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 A0A0G2JN53 185 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 DPP6P42658 865 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 RGS6P49758 472 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 ZCCHC12Q6PEW1 402 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 CLECL1Q8IZS7 167 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 GALNT11Q8NCW6 608 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 TXNDC15Q96J42 360 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 CD180Q99467 661 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 RANGRFQ9HD47 186 aaPredicted RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 MKKSQ9NPJ1 570 aaPredicted RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 CARNS1A5YM72 827 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 GLTPD2A6NH11 291 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 EOMESO95936 686 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 AGR2O95994 175 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 IL3P08700 152 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 PFKLP17858 780 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 ACADLP28330 430 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 GRK6P43250 576 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 NRIP1P48552 1158 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 FPGSQ05932 587 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 FAM76BQ5HYJ3 339 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 PLAG1Q6DJT9 500 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 CCSAPQ6IQ19 270 aaPredicted RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 FAM198BQ6UWH4 519 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 CEACAM19Q7Z692 300 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 CADM3Q8N126 398 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 TTLQ8NG68 377 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 RAB8BQ92930 207 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 FATE1Q969F0 183 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 IGSF8Q969P0 613 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 GPER1Q99527 375 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 KXD1Q9BQD3 176 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 MTG2Q9H4K7 406 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 MED31Q9Y3C7 131 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 PLATP00750 562 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 CAPNS1P04632 268 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 RPS5P46782 204 aaKnown RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 SF3A2Q15428 464 aaKnown RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 GPR19Q15760 415 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 TBCEQ15813 527 aaPredicted RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 CNIH2Q6PI25 160 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 PRSS55Q6UWB4 352 aaPredicted RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 OR10H5Q8NGA6 315 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 PGAP3Q96FM1 320 aaPredicted RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 RIPOR3Q96MK2 946 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 ZNF285Q96NJ3 590 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 ASB4Q9Y574 426 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 UPK3BL1B0FP48 263 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 UPK3BL2E5RIL1 263 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 EDN1P05305 212 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 MPC1LP0DKB6 136 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 CSNK2A2P19784 350 aaPredicted RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 TIA1P31483 386 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMC5-201ENST00000361138 TNFSF8P32971 234 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 EVI2BP34910 448 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 SF3B4Q15427 424 aaKnown RBP eCLIP13.4□□□□□ -0.265e-6■■□□□ 12.2
SMC5-201ENST00000361138 SPATC1Q76KD6 591 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 ZFP41Q8N8Y5 198 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 BBS10Q8TAM1 723 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 HDHD5Q9BXW7 423 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 MRPS30Q9NP92 439 aaKnown RBP13.4□□□□□ -0.26
SMC5-201ENST00000361138 DLGAP4Q9Y2H0 992 aa13.4□□□□□ -0.26
SMC5-201ENST00000361138 PRH1P02810 166 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 PRNPP04156 253 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 RETREG3Q86VR2 466 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 ATCAYQ86WG3 371 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 SAMD14Q8IZD0 417 aaPredicted RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 ZNF676Q8N7Q3 588 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 MAL2Q969L2 176 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 GKN1Q9NS71 199 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 COPZ2Q9P299 210 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 MAST2Q6P0Q8 1798 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 TCRBV5S1A1TA0A578 114 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 B8ZZF3 427 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 ZNF670-ZNF695F2Z2N8 137 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 SMAD9O15198 467 aaKnown RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 PAHP00439 452 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 ADAP00813 363 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 GDPD4Q6W3E5 623 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 GALNT7Q86SF2 657 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 AMIGO3Q86WK7 504 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 OR9Q2Q8NGE9 314 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 TM9SF2Q99805 663 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 EMC3Q9P0I2 261 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 RABL2AQ9UBK7 228 aaPredicted RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 FBXO10Q9UK96 956 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms