RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 C10orf120Q5SQS8 335 aa13.75□□□□□ -0.21
APP-205ENST00000358918 ANKRD54Q6NXT1 300 aa13.75□□□□□ -0.21
APP-205ENST00000358918 HDDC2Q7Z4H3 204 aa13.75□□□□□ -0.21
APP-205ENST00000358918 LAS2Q8IYD9 372 aa13.75□□□□□ -0.21
APP-205ENST00000358918 NAGSQ8N159 534 aa13.75□□□□□ -0.21
APP-205ENST00000358918 CLDN19Q8N6F1 224 aa13.75□□□□□ -0.21
APP-205ENST00000358918 SLAIN1Q8ND83 568 aa13.75□□□□□ -0.21
APP-205ENST00000358918 PROKR2Q8NFJ6 384 aa13.75□□□□□ -0.21
APP-205ENST00000358918 DUSP26Q9BV47 211 aa13.75□□□□□ -0.21
APP-205ENST00000358918 ARL15Q9NXU5 204 aa13.75□□□□□ -0.21
APP-205ENST00000358918 DNAJC27Q9NZQ0 273 aa13.75□□□□□ -0.21
APP-205ENST00000358918 ELF5Q9UKW6 265 aaPredicted RBP13.75□□□□□ -0.21
APP-205ENST00000358918 UPK3BL1B0FP48 263 aa13.75□□□□□ -0.21
APP-205ENST00000358918 UPK3BL2E5RIL1 263 aa13.75□□□□□ -0.21
APP-205ENST00000358918 F5H5T6 163 aa13.75□□□□□ -0.21
APP-205ENST00000358918 J3KTA2 159 aa13.75□□□□□ -0.21
APP-205ENST00000358918 SNRPGP62308 76 aaKnown RBP13.75□□□□□ -0.21
APP-205ENST00000358918 FAM151BQ6UXP7 276 aa13.75□□□□□ -0.21
APP-205ENST00000358918 LRRC70Q7Z2Q7 622 aa13.75□□□□□ -0.21
APP-205ENST00000358918 KCTD20Q7Z5Y7 419 aa13.75□□□□□ -0.21
APP-205ENST00000358918 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
APP-205ENST00000358918 VPS37AQ8NEZ2 397 aa13.75□□□□□ -0.21
APP-205ENST00000358918 FCRL1Q96LA6 429 aa13.75□□□□□ -0.21
APP-205ENST00000358918 KCTD7Q96MP8 289 aa13.75□□□□□ -0.21
APP-205ENST00000358918 GPR137Q96N19 417 aa13.75□□□□□ -0.21
APP-205ENST00000358918 IL17CQ9P0M4 197 aa13.75□□□□□ -0.21
APP-205ENST00000358918 RABL2BQ9UNT1 228 aa13.75□□□□□ -0.21
APP-205ENST00000358918 RPL36Q9Y3U8 105 aaKnown RBP13.75□□□□□ -0.21
APP-205ENST00000358918 PRSS21Q9Y6M0 314 aa13.75□□□□□ -0.21
APP-205ENST00000358918 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
APP-205ENST00000358918 YY2O15391 372 aa13.74□□□□□ -0.21
APP-205ENST00000358918 PCDH7O60245 1069 aa13.74□□□□□ -0.21
APP-205ENST00000358918 TPPPO94811 219 aa13.74□□□□□ -0.21
APP-205ENST00000358918 TRBC1P01850 177 aa13.74□□□□□ -0.21
APP-205ENST00000358918 FAM157BP0CG42 384 aa13.74□□□□□ -0.21
APP-205ENST00000358918 ETV3P41162 512 aa13.74□□□□□ -0.21
APP-205ENST00000358918 CRATP43155 626 aa13.74□□□□□ -0.21
APP-205ENST00000358918 ABATP80404 500 aa13.74□□□□□ -0.21
APP-205ENST00000358918 FOXD4Q12950 439 aaPredicted RBP13.74□□□□□ -0.21
APP-205ENST00000358918 NFE2L1Q14494 772 aa13.74□□□□□ -0.21
APP-205ENST00000358918 SF3A2Q15428 464 aaKnown RBP13.74□□□□□ -0.21
APP-205ENST00000358918 TCTN1Q2MV58 587 aa13.74□□□□□ -0.21
APP-205ENST00000358918 GPRC6AQ5T6X5 926 aa13.74□□□□□ -0.21
APP-205ENST00000358918 FRG2Q64ET8 278 aa13.74□□□□□ -0.21
APP-205ENST00000358918 TEX261Q6UWH6 196 aa13.74□□□□□ -0.21
APP-205ENST00000358918 ANGPTL8Q6UXH0 198 aa13.74□□□□□ -0.21
APP-205ENST00000358918 ZNF296Q8WUU4 475 aaPredicted RBP13.74□□□□□ -0.21
APP-205ENST00000358918 GEMIN6Q8WXD5 167 aaKnown RBP13.74□□□□□ -0.21
APP-205ENST00000358918 TMEM203Q969S6 136 aa13.74□□□□□ -0.21
APP-205ENST00000358918 FUBP3Q96I24 572 aaKnown RBP eCLIP13.74□□□□□ -0.21
APP-205ENST00000358918 CASD1Q96PB1 797 aa13.74□□□□□ -0.21
APP-205ENST00000358918 FRG2BQ96QU4 278 aa13.74□□□□□ -0.21
APP-205ENST00000358918 MED18Q9BUE0 208 aa13.74□□□□□ -0.21
APP-205ENST00000358918 PPIL3Q9H2H8 161 aaKnown RBP13.74□□□□□ -0.21
APP-205ENST00000358918 RERGLQ9H628 205 aa13.74□□□□□ -0.21
APP-205ENST00000358918 ACER3Q9NUN7 267 aa13.74□□□□□ -0.21
APP-205ENST00000358918 MRPL39Q9NYK5 338 aaKnown RBP13.74□□□□□ -0.21
APP-205ENST00000358918 COQ3Q9NZJ6 369 aa13.74□□□□□ -0.21
APP-205ENST00000358918 MALT1Q9UDY8 824 aa13.74□□□□□ -0.21
APP-205ENST00000358918 ING4Q9UNL4 249 aa13.74□□□□□ -0.21
APP-205ENST00000358918 SNX11Q9Y5W9 270 aa13.74□□□□□ -0.21
APP-205ENST00000358918 U3KQ87 197 aa13.74□□□□□ -0.21
APP-205ENST00000358918 DOCK4Q8N1I0 1966 aa13.74□□□□□ -0.21
APP-205ENST00000358918 C1orf226A1L170 272 aa13.74□□□□□ -0.21
APP-205ENST00000358918 SMIM30A4D0T7 59 aa13.74□□□□□ -0.21
APP-205ENST00000358918 INMT-MINDY4F8WBC2 141 aa13.74□□□□□ -0.21
APP-205ENST00000358918 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
APP-205ENST00000358918 SYN3O14994 580 aa13.74□□□□□ -0.21
APP-205ENST00000358918 PRAMEF1O95521 474 aa13.74□□□□□ -0.21
APP-205ENST00000358918 GASTP01350 101 aa13.74□□□□□ -0.21
APP-205ENST00000358918 ATF4P18848 351 aaPredicted RBP13.74□□□□□ -0.21
APP-205ENST00000358918 RPIAP49247 311 aa13.74□□□□□ -0.21
APP-205ENST00000358918 GAB1Q13480 694 aa13.74□□□□□ -0.21
APP-205ENST00000358918 GANABQ14697 944 aaKnown RBP13.74□□□□□ -0.21
APP-205ENST00000358918 FAM122CQ6P4D5 195 aa13.74□□□□□ -0.21
APP-205ENST00000358918 CNIH2Q6PI25 160 aa13.74□□□□□ -0.21
APP-205ENST00000358918 USP30Q70CQ3 517 aa13.74□□□□□ -0.21
APP-205ENST00000358918 CDH24Q86UP0 819 aa13.74□□□□□ -0.21
APP-205ENST00000358918 TAGAPQ8N103 731 aa13.74□□□□□ -0.21
APP-205ENST00000358918 TMEM145Q8NBT3 493 aa13.74□□□□□ -0.21
APP-205ENST00000358918 ZNF680Q8NEM1 530 aa13.74□□□□□ -0.21
APP-205ENST00000358918 COMMD3Q9UBI1 195 aa13.74□□□□□ -0.21
APP-205ENST00000358918 PHF11Q9UIL8 331 aa13.74□□□□□ -0.21
APP-205ENST00000358918 BTNL2Q9UIR0 455 aa13.74□□□□□ -0.21
APP-205ENST00000358918 LRFN2Q9ULH4 789 aa13.74□□□□□ -0.21
APP-205ENST00000358918 MYO16Q9Y6X6 1858 aa13.73□□□□□ -0.21
APP-205ENST00000358918 KDELR3O43731 214 aa13.73□□□□□ -0.21
APP-205ENST00000358918 GNRH1P01148 92 aa13.73□□□□□ -0.21
APP-205ENST00000358918 XCR1P46094 333 aa13.73□□□□□ -0.21
APP-205ENST00000358918 LIMS1P48059 325 aa13.73□□□□□ -0.21
APP-205ENST00000358918 SLC11A1P49279 550 aa13.73□□□□□ -0.21
APP-205ENST00000358918 DGKEP52429 567 aa13.73□□□□□ -0.21
APP-205ENST00000358918 ZNF91Q05481 1191 aa13.73□□□□□ -0.21
APP-205ENST00000358918 IL18Q14116 193 aa13.73□□□□□ -0.21
APP-205ENST00000358918 ELOAQ14241 798 aaKnown RBP13.73□□□□□ -0.21
APP-205ENST00000358918 TMEM201Q5SNT2 666 aa13.73□□□□□ -0.21
APP-205ENST00000358918 PDZD3Q86UT5 571 aa13.73□□□□□ -0.21
APP-205ENST00000358918 NPAS3Q8IXF0 933 aa13.73□□□□□ -0.21
APP-205ENST00000358918 SDR16C5Q8N3Y7 309 aa13.73□□□□□ -0.21
APP-205ENST00000358918 L3MBTL4Q8NA19 623 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms