RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ZNF547Q8IVP9 402 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ING5Q8WYH8 240 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ZSWIM3Q96MP5 696 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 MAPKAP1Q9BPZ7 522 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 CDADC1Q9BWV3 514 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 KLHL25Q9H0H3 589 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 C11orf16Q9NQ32 467 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 MARK1Q9P0L2 795 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 FTSJ1Q9UET6 329 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ASF1AQ9Y294 204 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 PCDHGA3Q9Y5H0 932 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 TRBV4-1A0A0J9YWV2 114 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ISPDA4D126 451 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 EFCAB10A6NFE3 127 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ZAR1LA6NP61 321 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 PLK4O00444 970 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ZW10O43264 779 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 PI15O43692 258 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SH3BP5O60239 455 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 POP7O75817 140 aaKnown RBP8.19□□□□□ -1.1
RFX3-202ENST00000358730 FGF19O95750 216 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 RECKO95980 971 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 GASTP01350 101 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 CLTBP09497 229 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 C6P13671 934 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 PTPN2P17706 415 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 UQCRC2P22695 453 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ITGB8P26012 769 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 CNR2P34972 360 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ALDH9A1P49189 494 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ERVFC1P60507 584 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 IRF3Q14653 427 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 TSTQ16762 297 aaKnown RBP8.19□□□□□ -1.1
RFX3-202ENST00000358730 ZNF181Q2M3W8 571 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 REEP3Q6NUK4 255 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 UNC5DQ6UXZ4 953 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SLC30A8Q8IWU4 369 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 POC5Q8NA72 575 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 C9orf43Q8TAL5 461 aaPredicted RBP8.19□□□□□ -1.1
RFX3-202ENST00000358730 CRELD1Q96HD1 420 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 OR5M11Q96RB7 305 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SPATA7Q9P0W8 599 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 PRKAB1Q9Y478 270 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 A3GALT2U3KPV4 340 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 RTCAO00442 366 aaKnown RBP8.19□□□□□ -1.1
RFX3-202ENST00000358730 LZTS3O60299 673 aaPredicted RBP8.19□□□□□ -1.1
RFX3-202ENST00000358730 DLGAP3O95886 979 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 HMGA2P52926 109 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 MAPK12P53778 367 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 CRISP1P54107 249 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 LEXMQ3ZCV2 418 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SLC9B2Q86UD5 537 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 C12orf40Q86WS4 652 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 HEATR4Q86WZ0 1026 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 LACC1Q8IV20 430 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 KRT78Q8N1N4 520 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 HORMAD2Q8N7B1 307 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 FAM83FQ8NEG4 500 aaPredicted RBP8.19□□□□□ -1.1
RFX3-202ENST00000358730 OR5AR1Q8NGP9 310 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 WDR36Q8NI36 951 aaKnown RBP8.19□□□□□ -1.1
RFX3-202ENST00000358730 HCAR2Q8TDS4 363 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SP140LQ9H930 580 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 CPNE5Q9HCH3 593 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SLAMF7Q9NQ25 335 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 CLN6Q9NWW5 311 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SAGE1Q9NXZ1 904 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SH3D21A4FU49 640 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ARRDC5A6NEK1 342 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ANKDD1BA6NHY2 528 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PLPP1O14494 284 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 FFAR1O14842 300 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 MPZL2O60487 215 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 MMP20O60882 483 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 SOX14O95416 240 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PRNPP04156 253 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 CYP17A1P05093 508 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ADRA2AP08913 450 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 GTF2E2P29084 291 aaKnown RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 MAGEA8P43361 318 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 UGT2B15P54855 530 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 LIM2P55344 173 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 HSPB3Q12988 150 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 TP53BP2Q13625 1128 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PUM1Q14671 1186 aaKnown RBP eCLIP8.18□□□□□ -1.1
RFX3-202ENST00000358730 DHCR24Q15392 516 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 FRMPD2BQ6IN97 320 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 FAM83HQ6ZRV2 1179 aaPredicted RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 CLIP4Q8N3C7 705 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 PARP16Q8N5Y8 322 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 SLC38A5Q8WUX1 472 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 OTUB2Q96DC9 234 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ABHD8Q96I13 439 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 IL4I1Q96RQ9 567 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 MGLLQ99685 303 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 CDCA4Q9BXL8 241 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 ZDHHC5Q9C0B5 715 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 NXF2Q9GZY0 626 aaKnown RBP8.18□□□□□ -1.1
RFX3-202ENST00000358730 ABCG4Q9H172 646 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 DPEP2Q9H4A9 486 aa8.18□□□□□ -1.1
RFX3-202ENST00000358730 CNOT2Q9NZN8 540 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms