RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CLECL1Q8IZS7 167 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 RNF148Q8N7C7 305 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 ATOH1Q92858 354 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 CIDECQ96AQ7 238 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 BHLHE41Q9C0J9 482 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 ROGDIQ9GZN7 287 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 PAIP1Q9H074 479 aaKnown RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 SYNDIG1Q9H7V2 258 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 MIEF1Q9NQG6 463 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 LYARQ9NX58 379 aaKnown RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 SLC25A37Q9NYZ2 338 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 VAPAQ9P0L0 249 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 C5AR2Q9P296 337 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 NAALAD2Q9Y3Q0 740 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 HCN4Q9Y3Q4 1203 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 COL27A1Q8IZC6 1860 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 CUL9Q8IWT3 2517 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 TRBV5-3A0A0A0MS03 114 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 FITM1A5D6W6 292 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 WASHC1A8K0Z3 465 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 NTN3O00634 580 aaPredicted RBP17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 PROM1O43490 865 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 BCAS2O75934 225 aaPredicted RBP17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 AIFM1O95831 613 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 ANKRD34CP0C6C1 535 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 ACP1P24666 158 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 TRPC1P48995 793 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 ALDH9A1P49189 494 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 OLR1P78380 273 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 LRRC74AQ0VAA2 488 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 TRAP1Q12931 704 aaKnown RBP17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 SLC14A1Q13336 389 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 GTDC1Q4AE62 458 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 C18orf63Q68DL7 685 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 FAM180BQ6P0A1 224 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 DNAJC14Q6Y2X3 702 aaPredicted RBP17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 FAM47BQ8NA70 645 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 STMN2Q93045 179 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 ANKRD27Q96NW4 1050 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 DCLRE1BQ9H816 532 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 RNPEPL1Q9HAU8 725 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 ENAMQ9NRM1 1142 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 ATAD3AQ9NVI7 634 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 BCAP29Q9UHQ4 241 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 L3MBTL1Q9Y468 752 aa17.17■□□□□ 0.34
SMARCD3-202ENST00000356800 PRSS51A0A1B0GVH4 220 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 TMEM150CB9EJG8 249 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 PGRMC2O15173 223 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 B3GALT2O43825 422 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 DNAJA2O60884 412 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 MSL3P1P0C860 447 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 DRD2P14416 443 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 LIM2P55344 173 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 EEFSECP57772 596 aaKnown RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 MS4A2Q01362 244 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 CCNIQ14094 377 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 SNCBQ16143 134 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 RABL3Q5HYI8 236 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 TCTE1Q5JU00 501 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 ANXA8L1Q5VT79 327 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 ENDOVQ8N8Q3 282 aaKnown RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 RCBTB1Q8NDN9 531 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 VPS37AQ8NEZ2 397 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 OR9A4Q8NGU2 314 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 ZNF764Q96H86 408 aaPredicted RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 CCDC74BQ96LY2 380 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 CCDC115Q96NT0 180 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 GFM1Q96RP9 751 aaKnown RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 SH3GL1Q99961 368 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 TMEM9BQ9NQ34 198 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 FTSJ1Q9UET6 329 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 BTNL2Q9UIR0 455 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 HYKKA2RU49 373 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 GLOD5A6NK44 160 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 SGK494L7N484 410 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 RNASET2O00584 256 aaKnown RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 RFXANKO14593 260 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 FOXS1O43638 330 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 GSNP06396 782 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 TCN1P20061 433 aaPredicted RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 ZNF10P21506 573 aaPredicted RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 TGM1P22735 817 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 FLOT2Q14254 428 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 CSRP2Q16527 193 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 NAXDQ8IW45 347 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 SLITRK4Q8IW52 837 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 FAM156AQ8NDB6 213 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 OR5T3Q8NGG3 340 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 OR1L3Q8NH93 324 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 N4BP2L2Q92802 583 aaPredicted RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 DPYSL5Q9BPU6 564 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 FAIM2Q9BWQ8 316 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 SLAMF7Q9NQ25 335 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 TAS2R7Q9NYW3 318 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 GMPR2Q9P2T1 348 aaKnown RBP17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 CES1P1Q9UKY3 287 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 DAPP1Q9UN19 280 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 AP3M1Q9Y2T2 418 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 PCDHB14Q9Y5E9 798 aa17.16■□□□□ 0.34
SMARCD3-202ENST00000356800 D6RAR5 112 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms