RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 PLET1Q6UQ28 207 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 MSANTD1Q6ZTZ1 278 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 SIX5Q8N196 739 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 CADM2Q8N3J6 435 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 OR2A14Q96R47 310 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 OR4K3Q96R72 315 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 SLC25A13Q9UJS0 675 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 PRAMEF25A6NGN4 478 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 CCNYL3P0C7X3 344 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 DSTNP60981 165 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 FKBP1BP68106 108 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 IRF5Q13568 498 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 NCF4Q15080 339 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 ERAP2Q6P179 960 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 GLCCI1Q86VQ1 547 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 NPAS4Q8IUM7 802 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.76□□□□□ -0.37
NCDN-201ENST00000356090 UBQLNLQ8IYU4 475 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 IL17FQ96PD4 163 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 YIPF4Q9BSR8 244 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 UCK2Q9BZX2 261 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 IRF2BPLQ9H1B7 796 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 SNX7Q9UNH6 387 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 ENPP4Q9Y6X5 453 aa12.76□□□□□ -0.37
NCDN-201ENST00000356090 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 FAM172BPA6NC97 362 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 INPPL1O15357 1258 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 SGTAO43765 313 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 PQBP1O60828 265 aaKnown RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 PSIP1O75475 530 aaKnown RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 TNFRSF21O75509 655 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 HOXB9P17482 250 aaPredicted RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 MYL12AP19105 171 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 GPC1P35052 558 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 SPIN4Q56A73 249 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 ZNF57Q68EA5 555 aaPredicted RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 HSD11B1LQ7Z5J1 315 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 CCDC190Q86UF4 302 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 FLCNQ8NFG4 579 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 CYB5D2Q8WUJ1 264 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 ART5Q96L15 291 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 MAPKAP1Q9BPZ7 522 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 ZNF334Q9HCZ1 680 aaPredicted RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 MRPL17Q9NRX2 175 aaKnown RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 PLCXD1Q9NUJ7 323 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 SEC14L3Q9UDX4 400 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 GPR52Q9Y2T5 361 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 CMAHPQ9Y471 501 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 PRKAB1Q9Y478 270 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 KLK4Q9Y5K2 254 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 OR51B4Q9Y5P0 310 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 TET1Q8NFU7 2136 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 A0A1W2PRU2 124 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 ARHGEF9O43307 516 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 SLC28A2O43868 658 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 ALPPL2P10696 532 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 MYL9P24844 172 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 IL12RB1P42701 662 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 TBPL1P62380 186 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 RAE1P78406 368 aaKnown RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.75□□□□□ -0.37
NCDN-201ENST00000356090 PIN1Q13526 163 aaPredicted RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 CLEC12AQ5QGZ9 265 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 OR2G6Q5TZ20 316 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 CST9Q5W186 159 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 OR52N2Q8NGI0 321 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 WDR20Q8TBZ3 569 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 TMEM80Q96HE8 168 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 OPALINQ96PE5 141 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 TBC1D17Q9HA65 648 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 GPATCH2Q9NW75 528 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 BTNL2Q9UIR0 455 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 GBF1Q92538 1859 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 CASKO14936 926 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 CSO75390 466 aaKnown RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 NME6O75414 186 aaPredicted RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 ARHGEF15O94989 841 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 CH25HO95992 272 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 SEMG1P04279 462 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 ZNF8P17098 575 aaPredicted RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 PSMA3P25788 255 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 EIF4HQ15056 248 aaKnown RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 SNAPC1Q16533 368 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 OXR1Q8N573 874 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 C2orf15Q8WU43 125 aaKnown RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 TBC1D20Q96BZ9 403 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 TRMT61AQ96FX7 289 aaKnown RBP12.75□□□□□ -0.37
NCDN-201ENST00000356090 SIGLEC11Q96RL6 698 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 ZIC5Q96T25 663 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 TM9SF2Q99805 663 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 SLC22A4Q9H015 551 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 HHATLQ9HCP6 504 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 GULP1Q9UBP9 304 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 ENOPH1Q9UHY7 261 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 TMPRSS11EQ9UL52 423 aa12.75□□□□□ -0.37
NCDN-201ENST00000356090 SNX11Q9Y5W9 270 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms