RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 LHFPL3Q86UP9 236 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 CARM1Q86X55 608 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 CCDC36Q8IYA8 594 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 SLC43A3Q8NBI5 491 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 GLB1L3Q8NCI6 653 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 C1orf216Q8TAB5 229 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 EFHD2Q96C19 240 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 SLC7A5P2Q9GIP4 190 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 TREM1Q9NP99 234 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 NECTIN3Q9NQS3 549 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 EXTL2Q9UBQ6 330 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 EDARQ9UNE0 448 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 LOC105369274A0A096LPK9 316 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 SLC31A1O15431 190 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 LATO43561 262 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 OR6A2O95222 327 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 PEX11BO96011 259 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 NTSP30990 170 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 PPM1AP35813 382 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 RPS26P62854 115 aaKnown RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 ZNF234Q14588 700 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 HEPACAMQ14CZ8 416 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 USF2Q15853 346 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 IQCHQ86VS3 1027 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 OR4N4Q8N0Y3 316 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 SYNPOQ8N3V7 929 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 LILRA3Q8N6C8 439 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 FAM98AQ8NCA5 519 aaKnown RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 CSGALNACT1Q8TDX6 532 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 DOK4Q8TEW6 326 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 TCEAL4Q96EI5 215 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 FERD3LQ96RJ6 166 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 POPDC3Q9HBV1 291 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 ABHD14A-ACY1A0A1B0GW23 586 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 GNB5O14775 395 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 TGM5O43548 720 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 HOXC13P31276 330 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 NKX3-2P78367 333 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 GALNT1Q10472 559 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 NPRL3Q12980 569 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 LCN8Q6JVE9 175 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 SLC25A25Q6KCM7 469 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 NOXA1Q86UR1 476 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 ZNF615Q8N8J6 731 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 GOLM1Q8NBJ4 401 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 SLC9A6Q92581 669 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 MAELQ96JY0 434 aaKnown RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 FEVQ99581 238 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 C5AR2Q9P296 337 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 GULP1Q9UBP9 304 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 ENPP5Q9UJA9 477 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 MAB21L2Q9Y586 359 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 EEF1E1O43324 174 aaKnown RBP13.49□□□□□ -0.25
SREBF1-202ENST00000355815 ERP29P30040 261 aaKnown RBP13.49□□□□□ -0.25
SREBF1-202ENST00000355815 SSTR2P30874 369 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 CCR7P32248 378 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 IDUAP35475 653 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 ATP4BP51164 291 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 YBX1P67809 324 aaKnown RBP13.49□□□□□ -0.25
SREBF1-202ENST00000355815 CAP1Q01518 475 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 GRM2Q14416 872 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 FBXO43Q4G163 708 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 C4orf46Q504U0 113 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 ANKRD54Q6NXT1 300 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 TEX26Q8N6G2 289 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 PXYLP1Q8TE99 480 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 MRPL48Q96GC5 212 aaKnown RBP13.49□□□□□ -0.25
SREBF1-202ENST00000355815 MAGEB10Q96LZ2 347 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-202ENST00000355815 AGAP4Q96P64 663 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 BCL7BQ9BQE9 202 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 DUS2Q9NX74 493 aaKnown RBP13.49□□□□□ -0.25
SREBF1-202ENST00000355815 MED11Q9P086 117 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 PCDHGA11Q9Y5H2 935 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 TRBC2A0A5B9 178 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 C8GP07360 202 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 LAMP1P11279 417 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 SRCP12931 536 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 DCTP40126 519 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 SSR2P43308 183 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 RGS8P57771 180 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-202ENST00000355815 TBPL2Q6SJ96 375 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 GALNTL5Q7Z4T8 443 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 SAMD12Q8N8I0 201 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 SNX33Q8WV41 574 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 NCSTNQ92542 709 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 RHBDF1Q96CC6 855 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 HDHD5Q9BXW7 423 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 UTS2RQ9UKP6 389 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 MEIOCA2RUB1 952 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 OR1F1O43749 312 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 SLC16A8O95907 504 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 PTTG1O95997 202 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 PRPS1L1P21108 318 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 ACSL1P33121 698 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 DOC2AQ14183 400 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 SLC36A3Q495N2 470 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 SLC25A24Q6NUK1 477 aa13.49□□□□□ -0.25
SREBF1-202ENST00000355815 PAMR1Q6UXH9 720 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms