RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ZNF451Q9Y4E5 1061 aa21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 CLCA1A8K7I4 914 aa21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 CCNB2O95067 398 aa21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 DGCR6Q14129 220 aa21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 NUDT13Q86X67 352 aa21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 MMP21Q8N119 569 aa21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 PHF10Q8WUB8 498 aaKnown RBP21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 RLIMQ9NVW2 624 aa21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 CUEDC1Q9NWM3 386 aaPredicted RBP21.2■□□□□ 0.98
NKX2-1-201ENST00000354822 PCDH8O95206 1070 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 DRD3P35462 400 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 FRKP42685 505 aaPredicted RBP21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 RUNX3Q13761 415 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 C9orf50Q5SZB4 431 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 DNAJC22Q8N4W6 341 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 NIPSNAP1Q9BPW8 284 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 ITPAQ9BY32 194 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 FKBP14Q9NWM8 211 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 CFAP20Q9Y6A4 193 aaKnown RBP21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 H7BY64 318 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 PDE9AO76083 593 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 PCBP4P57723 403 aaKnown RBP21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 TRA2BP62995 288 aaKnown RBP21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 CYP4F2P78329 520 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 DMPKQ09013 629 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 TBCEQ15813 527 aaPredicted RBP21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 NUDT18Q6ZVK8 323 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 ZBED6CLQ96FA7 236 aaPredicted RBP21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 PRAP1Q96NZ9 151 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 MAPKAP1Q9BPZ7 522 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 TMEM121BQ9BXQ6 578 aaPredicted RBP21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 CERS4Q9HA82 394 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 TM7SF3Q9NS93 570 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 ERGIC3Q9Y282 383 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 CORINQ9Y5Q5 1042 aa21.19■□□□□ 0.98
NKX2-1-201ENST00000354822 A0A1W2PPV9 198 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 RTCAO00442 366 aaKnown RBP21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 MAGEB3O15480 346 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 KAT7O95251 611 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 GJA4P35212 333 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 OPRL1P41146 370 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 EIF2DP41214 584 aaKnown RBP21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 ALDH9A1P49189 494 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 CLCNKAP51800 687 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 Q6ZPB1 254 aaPredicted RBP21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 ZBTB46Q86UZ6 589 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 SLC38A5Q8WUX1 472 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 SLC38A4Q969I6 547 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 LGALS12Q96DT0 336 aa21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 ACSS1Q9NUB1 689 aaPredicted RBP21.18■□□□□ 0.98
NKX2-1-201ENST00000354822 J3KTA2 159 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 PCDH17O14917 1159 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 CDK1P06493 297 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 CD36P16671 472 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 IDH2P48735 452 aaKnown RBP21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 TAS2R38P59533 333 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 MLC1Q15049 377 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 AGBL4Q5VU57 503 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 TMCO5AQ8N6Q1 288 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 TTLQ8NG68 377 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 CHPT1Q8WUD6 406 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 WDR26Q9H7D7 661 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 IMPAD1Q9NX62 359 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 HCN2Q9UL51 889 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 J3QRK9 145 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 CACNB4O00305 520 aaPredicted RBP21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 MPZL2O60487 215 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 CBLP22681 906 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 TRIM23P36406 574 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 VBP1P61758 197 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 CST6Q15828 149 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 DUSP7Q16829 419 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 EGFLAMQ63HQ2 1017 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 DCDC5Q6ZRR9 648 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 FAM92BQ6ZTR7 304 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 GET4Q7L5D6 327 aaPredicted RBP21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 C6orf120Q7Z4R8 191 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 HORMAD2Q8N7B1 307 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 DYNC2LI1Q8TCX1 351 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 RASSF5Q8WWW0 418 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 GGHQ92820 318 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 ALPK1Q96QP1 1244 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 FERD3LQ96RJ6 166 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 RSPH9Q9H1X1 276 aaPredicted RBP21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 SLAMF7Q9NQ25 335 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 TAS2R7Q9NYW3 318 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 KCND3Q9UK17 655 aa21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 YBX2Q9Y2T7 364 aaKnown RBP21.17■□□□□ 0.98
NKX2-1-201ENST00000354822 FEZF1A0PJY2 475 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 MID1O15344 667 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 NDUFS4O43181 175 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 OR1F1O43749 312 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 SH3BP5O60239 455 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 CLEC3AO75596 197 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 LCKP06239 509 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 TFPTP0C1Z6 253 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 GABRB1P18505 474 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 FCARP24071 287 aa21.16■□□□□ 0.98
NKX2-1-201ENST00000354822 RGS21Q2M5E4 152 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms