RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 CD320Q9NPF0 282 aa14.27□□□□□ -0.12
COL17A1-201ENST00000353479 BRD7Q9NPI1 651 aa14.27□□□□□ -0.12
COL17A1-201ENST00000353479 ANKMY1Q9P2S6 941 aa14.27□□□□□ -0.12
COL17A1-201ENST00000353479 HS3ST2Q9Y278 367 aa14.27□□□□□ -0.12
COL17A1-201ENST00000353479 HCRTR2O43614 444 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 QPRTQ15274 297 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 TMEM31Q5JXX7 168 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 FAM180BQ6P0A1 224 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 BLOC1S3Q6QNY0 202 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 EZH1Q92800 747 aaPredicted RBP14.27□□□□□ -0.13
COL17A1-201ENST00000353479 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.27□□□□□ -0.13
COL17A1-201ENST00000353479 SDK1Q7Z5N4 2213 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 SNNO75324 88 aaPredicted RBP14.27□□□□□ -0.13
COL17A1-201ENST00000353479 ZNF821O75541 412 aaPredicted RBP14.27□□□□□ -0.13
COL17A1-201ENST00000353479 H6PDO95479 791 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 ADRA1AP35348 466 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 PLCXD2Q0VAA5 305 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 MAPK14Q16539 360 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 LNX2Q8N448 690 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 PACRGLQ8N7B6 248 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 C16orf78Q8WTQ4 265 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 UHRF1Q96T88 793 aaPredicted RBP14.27□□□□□ -0.13
COL17A1-201ENST00000353479 IFT52Q9Y366 437 aa14.27□□□□□ -0.13
COL17A1-201ENST00000353479 PRSS38A1L453 326 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 NUDT6P53370 316 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 ADAM17P78536 824 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 VLDLRP98155 873 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 CARM1Q86X55 608 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 TSSK6Q9BXA6 273 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 PAPPA2Q9BXP8 1791 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 UBE2QL1A1L167 161 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 EFCAB9A8MZ26 197 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 H3BNC9 293 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 PSMD9O00233 223 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 PDHA2P29803 388 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 SDC2P34741 201 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 MLLT1Q03111 559 aaPredicted RBP14.26□□□□□ -0.13
COL17A1-201ENST00000353479 VMACQ2NL98 169 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 CHST4Q8NCG5 386 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 SSNA1O43805 119 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 PRKAR1AP10644 381 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 MAOBP27338 520 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 TNFRSF4P43489 277 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 FADDQ13158 208 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 TRAM2Q15035 370 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 LIN52Q52LA3 116 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 TDHQ8IZJ6 230 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 CLECL1Q8IZS7 167 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 OR2L2Q8NH16 312 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 FAR1Q8WVX9 515 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 NT5C3BQ969T7 300 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 DIRAS2Q96HU8 199 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 CLEC4MQ9H2X3 399 aaPredicted RBP14.26□□□□□ -0.13
COL17A1-201ENST00000353479 ACTR10Q9NZ32 417 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 ZFR2Q9UPR6 939 aaKnown RBP14.26□□□□□ -0.13
COL17A1-201ENST00000353479 LOC100130705A0A1B0GUX0 176 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 CSTAP01040 98 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 HMGA1P17096 107 aaKnown RBP14.26□□□□□ -0.13
COL17A1-201ENST00000353479 LRP8Q14114 963 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 ZUFSPQ96AP4 578 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 MAPKAP1Q9BPZ7 522 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 PRSS16Q9NQE7 514 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 C14orf105Q9NVL8 296 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 C5AR2Q9P296 337 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 ADAMTS6Q9UKP5 1117 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 TCRBV5S1A1TA0A578 114 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 ZNF99A8MXY4 864 aaPredicted RBP14.26□□□□□ -0.13
COL17A1-201ENST00000353479 PLOD3O60568 738 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 CD2P06729 351 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 KCNC4Q03721 635 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 PDSS1Q5T2R2 415 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 KLHL36Q8N4N3 616 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 OR52E1Q8NGJ3 308 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 RHBDD1Q8TEB9 315 aa14.26□□□□□ -0.13
COL17A1-201ENST00000353479 A0A075B6Q4 140 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 FUT4P22083 530 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 TCTE1Q5JU00 501 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 NEIL2Q969S2 332 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 GSTO2Q9H4Y5 243 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 ANXA2P2A6NMY6 339 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 TP53I11O14683 189 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 ANXA2P07355 339 aaKnown RBP14.25□□□□□ -0.13
COL17A1-201ENST00000353479 IL12AP29459 219 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 SLC6A9P48067 706 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 EIF2B2P49770 351 aaKnown RBP14.25□□□□□ -0.13
COL17A1-201ENST00000353479 NPTX1Q15818 432 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 TAZQ16635 292 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 STON2Q8WXE9 905 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 KHSRPQ92945 711 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL17A1-201ENST00000353479 ARHGAP9Q9BRR9 750 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 SLC35C2Q9NQQ7 365 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 TNFRSF10DQ9UBN6 386 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 DNMT3AQ9Y6K1 912 aaPredicted RBP14.25□□□□□ -0.13
COL17A1-201ENST00000353479 TLX2O43763 284 aaPredicted RBP14.25□□□□□ -0.13
COL17A1-201ENST00000353479 KCNJ5P48544 419 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 NSDHLQ15738 373 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 NDUFAF5Q5TEU4 345 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 ZNF550Q7Z398 422 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 HDDC2Q7Z4H3 204 aa14.25□□□□□ -0.13
COL17A1-201ENST00000353479 GPR149Q86SP6 731 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms