RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FLRT1Q9NZU1 646 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 HCN3Q9P1Z3 774 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 EXTL2Q9UBQ6 330 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TRPS1Q9UHF7 1281 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TLR6Q9Y2C9 796 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 MAP4K5Q9Y4K4 846 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 MAB21L2Q9Y586 359 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 NYNRINQ9P2P1 1898 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SLC35F4A4IF30 521 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 MGAT4DA6NG13 374 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 M0R233 179 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 NFKBIEO00221 500 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 POMCP01189 267 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 EPOP01588 193 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ODC1P11926 461 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 GABRB1P18505 474 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ITGALP20701 1170 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 PTPN6P29350 595 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 RGRP47804 291 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 RGS19P49795 217 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ATP12AP54707 1039 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ZNF91Q05481 1191 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SRSF11Q05519 484 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 EIF2B5Q13144 721 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SERINC3Q13530 473 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CPTPQ5TA50 214 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SHFQ7M4L6 423 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SCD5Q86SK9 330 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CLDN22Q8N7P3 220 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ZBED3Q96IU2 234 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 KATNB1Q9BVA0 655 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ASB8Q9H765 288 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 NMNAT1Q9HAN9 279 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 TXNRD2Q9NNW7 524 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 NMRK2Q9NPI5 230 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 FAM105AQ9NUU6 356 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 TMEM248Q9NWD8 314 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 PIM2Q9P1W9 311 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 PCDHB11Q9Y5F2 797 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 PARP14Q460N5 1801 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CCDC88CQ9P219 2028 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 GOLGA4Q13439 2230 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 GLTPD2A6NH11 291 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 POM121CA8CG34 1229 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CA12O43570 354 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 AKAP8O43823 692 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 TPST2O60704 377 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 HIST1H2AGP0C0S8 130 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 HIST1H2ADP20671 130 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CHI3L1P36222 383 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 RPL35P42766 123 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 RPIAP49247 311 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 DSTNP60981 165 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 PURAQ00577 322 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CRYZQ08257 329 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 VEZF1Q14119 521 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 HEPACAMQ14CZ8 416 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 COL28A1Q2UY09 1125 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 IDNKQ5T6J7 187 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 MZT2AQ6P582 158 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 LRRTM3Q86VH5 581 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 MARCH9Q86YJ5 346 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 THEM5Q8N1Q8 247 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CARNMT1Q8N4J0 409 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ZNF366Q8N895 744 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 HJURPQ8NCD3 748 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 OR5AK3PQ8NH89 298 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 TM9SF4Q92544 642 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SLC9A6Q92581 669 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SGTBQ96EQ0 304 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 HIST1H2AHQ96KK5 128 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 HIST1H2AJQ99878 128 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 MARVELD1Q9BSK0 173 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 H2AFJQ9BTM1 129 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ATG10Q9H0Y0 220 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 NDUFB11Q9NX14 153 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CRLS1Q9UJA2 301 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 A0A1W2PPL8 197 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CHP2O43745 196 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 GPR32O75388 356 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SLC25A27O95847 323 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 TPOP07202 933 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 PTX3P26022 381 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ATP6V1E1P36543 226 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 LIMK1P53667 647 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 RBBP4Q09028 425 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 MLLT11Q13015 90 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ADAM15Q13444 863 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SCARB2Q14108 478 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 GRM7Q14831 915 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 HKDC1Q2TB90 917 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ATP13A5Q4VNC0 1218 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 RTL4Q6ZR62 310 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 KANSL1Q7Z3B3 1105 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SERPINA9Q86WD7 417 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 CPA6Q8N4T0 437 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 LSM14AQ8ND56 463 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 OR4K1Q8NGD4 311 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms